Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1351 ATGTTTCTCCAAATTGTCTTCCTCCTTTCCTTTCTCTTATCCACTTCCCATGCTACTGTTCAAGACTTCTGTGTGGCAGACCTCAAAAGTGCAGATGGCCCTGCAGGCTTTCCCTGCGTGCCACCTGCCAAAGTTACTTCAGATGACTTTGTGTTTGCTGGCTTATCTGAAGCTGCAAATGTCACAAACATAATCAATGCTGCTGTGTCCCCTGCATTTGTTGGTCAATTTCCAGGTGTTAATGGTCTTGATCTCTCTGCAGCAAGGTTAGACCTTGGTCCTGCAGGAGTTATACCACTGCACACTCATCCTGGTGCCAATGAACTTCTAATAGTGAACCAGGGTCACATCCTCGCTGGATTCATATCATCAAGTAACGTTGTTTATCAGAAGGTACTCAAAAGGGGAGAGCTTATGGTCTTCCCACAAGGATTGTTGCACTTTCAAATAGCAGCTCACAAGAGGAAGGCCATTGCTTTTGCTGTTTTCAGCAGTGCAAACCCTGGCCTCCAAATCCTTGACTTTGCACTCTTTGCCAGCAACTTCTCCACACCTTTGATCGCACAGACTACTTTCCTTGACCCTGACCTAGTCAAGAAGCTTAAGAGTGTCCTTGGGGGCAGTGGCTAA 630 0.4651 MFLQIVFLLSFLLSTSHATVQDFCVADLKSADGPAGFPCVPPAKVTSDDFVFAGLSEAANVTNIINAAVSPAFVGQFPGVNGLDLSAARLDLGPAGVIPLHTHPGANELLIVNQGHILAGFISSSNVVYQKVLKRGELMVFPQGLLHFQIAAHKRKAIAFAVFSSANPGLQILDFALFASNFSTPLIAQTTFLDPDLVKKLKSVLGGSG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1351 209 Pfam Cupin 54 195 IPR006045 -
Pvu10g1351 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 5 205 - -
Pvu10g1351 209 SMART Cupin_1_3 53 199 IPR006045 -
Pvu10g1351 209 Gene3D Jelly Rolls 16 208 IPR014710 -
Pvu10g1351 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 205 - -
Pvu10g1351 209 ProSitePatterns Germin family signature. 96 109 IPR019780 GO:0030145
Pvu10g1351 209 CDD cupin_OxOx 16 205 - -
Pvu10g1351 209 PRINTS Germin signature 101 121 IPR001929 GO:0030145
Pvu10g1351 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Pvu10g1351 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
Pvu10g1351 209 SUPERFAMILY RmlC-like cupins 18 203 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1351 Pvu-Chr10 39982780 39983851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1351 17 209 Miscellaneous Gene Families AT1G72610 65.285 7.89e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1351 - - gmx:100500326 358.607