Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1350 ATGAAGATTTTTTACACTCTTTTCCTTTTGGCTCTTCTCTCATCCATTTCCCATGCTTTTGTCAATGATTTCTGCGTAGCAAATCTAAATGGTCCAGATGGCCCTTCAGGGTACGAGTGCAAGGCACCTAACACAGTGACAGTGGATGACTTTGTGTTCTCTGGTTTTGTAGCTGGAAACACCTCAGGCATTTTCAATGCTGCTATAACCCCCGCATTTGTCTCTCAACTTCCAGGTGTGAATGGTCTTGGTTTATCTGTAGCACGATTAGACCTAGCCAAAGGTGGATTTGTTCCATTGCACTCACATACTGCTTCAAGTGAAATACTGATAATGGTGAAGGGTGAAATCACTGCTGGCTTTATCACACCTGCTGCAGCTTATCAAAAGACACTGAAACCAGGAGATATCATGGTTTTCCCACAAGGACTCTTGCATTTCCAAGTGAATTCTGGGAAGGGAAAAGCCACTGCTTATCTTGCTTTCAGTAATCCAAGCCCAGGAGCACAACTACTTGACCTTCTTTTATTCGGCAACAACTTGCCTTCTCAGTTGATTGCCCAAACTACCTTACTTGATTATGCACAAGTGAAGAAGCTCAAGGCTCGTTTTGGTGGCAGAGGATAG 627 0.437 MKIFYTLFLLALLSSISHAFVNDFCVANLNGPDGPSGYECKAPNTVTVDDFVFSGFVAGNTSGIFNAAITPAFVSQLPGVNGLGLSVARLDLAKGGFVPLHSHTASSEILIMVKGEITAGFITPAAAYQKTLKPGDIMVFPQGLLHFQVNSGKGKATAYLAFSNPSPGAQLLDLLLFGNNLPSQLIAQTTLLDYAQVKKLKARFGGRG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1350 208 PANTHER GERMIN-LIKE PROTEIN 8 204 - -
Pvu10g1350 208 CDD cupin_OxOx 17 204 - -
Pvu10g1350 208 SUPERFAMILY RmlC-like cupins 19 203 IPR011051 -
Pvu10g1350 208 SMART Cupin_1_3 54 198 IPR006045 -
Pvu10g1350 208 PRINTS Germin signature 101 121 IPR001929 GO:0030145
Pvu10g1350 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Pvu10g1350 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Pvu10g1350 208 Pfam Cupin 64 197 IPR006045 -
Pvu10g1350 208 Gene3D Jelly Rolls 18 207 IPR014710 -
Pvu10g1350 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 8 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1350 Pvu-Chr10 39977979 39978605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1350 3 206 Miscellaneous Gene Families AT5G20630 56.796 6.04e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1350 - - gmx:100813853 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1350 10 39977979 39978605 Pvu10g1350 10 39977979 39978605 ECH