Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1348 ATGAATACCATTGTGATTCTTTTGCTGTGTGCTCTTGTTTCATCCACTTCCCATGCTGCTAATCTGCAAGAATTCTGCGTAGCAGACCTCAAGGGTCCAGATAGCCCTTCTGGGTATCAATGCAAGCCTGCTAACAGAGTAACAGCTCAAGACTTTAAGTGCACTTTAGGACCAGGCATTTCAATCCCAGACAACGTCAAAATATACCCTTGCACTGTTCGCCAGGTTCATTCTCTGAATGGTCTTGGCATTTCTGCAGGACGTGTGGAGATTGAGAAAGGTGGATCGTTTCCAGTGCACACACATGCTGCCAATGAAATACTAATCATGGTTAAAGGTGAAATGACCGTTGGAATCTTGACACCTACCAGAGCTTTTGTGAACAGAGTCAAAGAAGGAGAACTTGTAGTTATTCCAGATGCACTGCAGCATTATCTTGTGAATTCTGGTAACGAGAAAGCCGTTGCTTATGCCACTTATAGTAGCCCTAACCCTCGTATCGATTTTCTTTATCAAATATTATTTGCCAACAACGTCTCTACCGCCACCATTGCCCAAACCACCTTCCTTGAAGAACCCCAAGTGAGGAGGCTCAAGGCTCGTTTCGGTGGCACCAACTAG 621 0.4493 MNTIVILLLCALVSSTSHAANLQEFCVADLKGPDSPSGYQCKPANRVTAQDFKCTLGPGISIPDNVKIYPCTVRQVHSLNGLGISAGRVEIEKGGSFPVHTHAANEILIMVKGEMTVGILTPTRAFVNRVKEGELVVIPDALQHYLVNSGNEKAVAYATYSSPNPRIDFLYQILFANNVSTATIAQTTFLEEPQVRRLKARFGGTN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1348 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 203 - -
Pvu10g1348 206 Gene3D Jelly Rolls 17 206 IPR014710 -
Pvu10g1348 206 PRINTS Germin signature 99 119 IPR001929 GO:0030145
Pvu10g1348 206 PRINTS Germin signature 128 148 IPR001929 GO:0030145
Pvu10g1348 206 PRINTS Germin signature 161 176 IPR001929 GO:0030145
Pvu10g1348 206 SMART Cupin_1_3 58 196 IPR006045 -
Pvu10g1348 206 PANTHER GERMIN-LIKE PROTEIN 8-13 7 203 - -
Pvu10g1348 206 SUPERFAMILY RmlC-like cupins 68 203 IPR011051 -
Pvu10g1348 206 CDD cupin_OxOx 18 202 - -
Pvu10g1348 206 Pfam Cupin 63 194 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1348 Pvu-Chr10 39963544 39964391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1348 4 206 Miscellaneous Gene Families AT5G20630 36.538 1.09e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1348 - - vra:106773097 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1348 10 39963544 39964391 Pvu10g1348 10 39963544 39964391 ECH