Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1335 ATGTTCTTCAGGGATAGTAAAATAATGGCAACTGCGACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTACACATTGAATCGGAAATTGCAGACTCAGGAAGAAATAGATGAAGATGCTGAAGAAAGTGGAAGTGAAACGCCCAGTGATACGCCATTAGGCAGTGCTCGTGTTTCCCATCGGTTAATCCAAGCCCCTGGTACGTGGTTAGAGACAATTTCAACGTTGTCAGAGACTCTCAGGTTCACGTACTCGGAGACACTTGGGAAATGGCCAATTGGGGATTTGGCGTTTGGTATCAGCTTTCTGCTCAAAAGGCAGGGGGACTACCAAGTTGACAGTGAATTTTGTGGTAATGATAGTGTACAGCTGAAAGGATCTGAGATTACTGCTGAACTTAAGTATCTCTTGAAATTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTCTTAGAAGAAACTGGCTACGATGAAGAAAATGTTCTCCTTCGGGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATAGCTGATCATGAGATGAGATGCCTTTTGCTATTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTGGTACCATTCCATCACACTGTTGTTCATCAGGGGGGTGTTAGAGATTTGGTTTTAGGTTATGCCCACTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTGGCCAATACCCTGATTATAAAGTCAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTCACTTATGTGTTGAGAGAGAGAAAGGAACTGTCTGTCGCTACATGTGTTACCTTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGTGTTAGTTTTATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTGGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCATACAAGAATACTTAGTACAGTCTATCGCTCTGCCTCAGCGTTAGGTTCTCGCCTCCCATCGATTGCCACGGCTAGAGCAAAAGTTGCTGGGGCTGGGGCTATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGAGCCAAGAGTATGGCTCAGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCCAAAGATGGGGAAAGTTCGCCTAGATCCTCCTCTACCAACACTGACAGTTCTGAAGCACTTCTTGGTTCCCCAAAGAAGGCGATTAATGCAAAGAATATGAACCTTCCAGTATCTTCGTCTATAGAAGAGTGGTCTTCTGAGATTGAATGTGGCAATGGAAGTGGTTCTGATACCGAGGTGGATGTTAATCATGGTGACCATCAGAACGTGATGGACCATGGCAGATATGATGATCAAATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTATGACGGTCCTGAGGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAGCTATAGCGGACGAAGTAGAGCAAGCCCAGAGTTCTGTACCAGAAATAAAAGAAGTCTACAGATTTTTCCCTCCAGGAAAGATAATGCACATTGTTACACTCCGTTCTGAGACGGAGGATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTTTCACAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGCAAGAAGCTACTGAGGGCCATGTTACACAAGAGGTGGTGTTATAG 2004 0.4466 MFFRDSKIMATATMATAAGAAALLYYTLNRKLQTQEEIDEDAEESGSETPSDTPLGSARVSHRLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGDYQVDSEFCGNDSVQLKGSEITAELKYLLKLLTLCWHFSKKPFPLFLEETGYDEENVLLREAKAGILKPAFTIIADHEMRCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWIAKLATPCLLEALGQYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVATCVTFAPAACMTWELAESGVSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEHTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWARPNLNLSSWSCMGPRRRALSAYSNSKDGESSPRSSSTNTDSSEALLGSPKKAINAKNMNLPVSSSIEEWSSEIECGNGSGSDTEVDVNHGDHQNVMDHGRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEAAIADEVEQAQSSVPEIKEVYRFFPPGKIMHIVTLRSETEDENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIERLIKELEQEATEGHVTQEVVL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1335 667 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 9 655 - -
Pvu10g1335 667 Coils Coil 638 658 - -
Pvu10g1335 667 SUPERFAMILY alpha/beta-Hydrolases 160 331 IPR029058 -
Pvu10g1335 667 Pfam Lipase 3 N-terminal region 59 139 IPR005592 GO:0016042
Pvu10g1335 667 Coils Coil 544 564 - -
Pvu10g1335 667 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 9 655 - -
Pvu10g1335 667 MobiDBLite consensus disorder prediction 435 466 - -
Pvu10g1335 667 MobiDBLite consensus disorder prediction 37 58 - -
Pvu10g1335 667 CDD Lipase_3 186 330 - -
Pvu10g1335 667 MobiDBLite consensus disorder prediction 437 459 - -
Pvu10g1335 667 Pfam Lipase (class 3) 194 331 IPR002921 GO:0006629
Pvu10g1335 667 Gene3D alpha/beta hydrolase 159 366 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1335 Pvu-Chr10 39789383 39795245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1335 23 655 Acyl Lipid Metabolism Gene Families AT3G14075 62.308 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1335 - - gsj:114390808 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1335 10 39789383 39795245 Pvu10g1335 10 39789383 39795245 ECH