Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1323 ATGGCGATGGACACTTCTCCTAATCCCGGTGACAGCTACTTCGATCCTCAGAACCTCTCTTCGCGACAGCAGTTTCGCAGATACGGGAAGAGGCATTCAACTTCAGGTGCTTCAATCCCTCCGGACAACTTGGCTTCTAAGTTGAGTGAAACTGGGTTGTTATATGATGGCCAAAGCATCCATAGTCCTACTAATGCGGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTACTTGGAAGAGAAGACATCATATTCCACTAGGAGGAGGTTGTCTGCCGACTTTCCTGGTGTGGATCCTGGTTTTGATTCTGTACGCTATTCATTAAAGGCTTGTAAGACAGAGGGTGACACATTGGGAGATGGTGCAGACACAATCTTTACTTTGTTTGCATCCCTGCTTGATTCTTCTTTGCAAGGACTGATGCCTATTGCCGATCTGATACTAAGAGTCGAGAATGCATGTCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATGTAAGGCATCGTGTTGTTGAGGACAAATTGATGAGGCAGAAGGCTCAACTTTTGCTTGATGAAGCGGCAACATGGTCTCTCTTGTGGAGAGGCATGAAATGGAGTGGCTCTACAACTATAGTGTCGGGAACCTCACATGTGGTGGCTTGTGAGTTTGTTGCGGAGGATCATACAGCTCAATTATGCCTTCGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGATTTGGAAGCAAAGGTGCGTGGATCTCATGTGGGTAGTTATCTCCCTAACTGTGGAGTTTGGCATCATACTCAGCGGTACCTGAAGAAAGGAACTCTTGACATGAATGTTGTTCATCATTTGGACTTTGATGCCCCAACTCGTGAAAATGCTAATCTATTGCCTGATGACAAGAAACAAGATGAATCTCTTCTAGAAGATGTGTGGACTCTTTTAAGGGCTGGACGGCTAGAAGAGGCTTGTGGACTTTGCCGGTCTGCTGGACAGCCTTGGAGAGCTTCTTCTATTTACCCATTTGGAGGCTTGAAGCAGTTTCCTTCTGTTGAAGTTCTGGTCAAGAATGGTAAAAATAGAACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAGCAAGGAGGGAAATGTGAAGCAGCTGTATATGCAGCCCAGTGTAGCAACCTAAAACGGATGCTTCCACTCTGCAATGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTGGACTTGGAAATCACTCGTTCACTGCCAGGGGGAGTTGATCAACTTAGAACTTTTGGAGATGTAATTGATGGAAGCCCTGGACACGCTGACGGTTCTTTTGAGCCTTCTAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAACAACCTCGACAACTCTCGTCTCTTCTGCAAAAACTTCATTCAGGGGAAATGATCCATGAATCTGTTACTAGACAATGCAAGGAGCAACAGCGACAAATTCAGATGACTTTAATGCTTGGGAACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTACTGAAGATAATCAGAATGTATTTAGGCCGTGTGGAGATCCTCAAATGATACGATTTGGTGCACATCTGGTCCTTGTGCTTCGATATTTACTAGCTGAGGAAATGAAGGACACCTTCAAGGACAAGATTCTCAGTGTTGGTGATAATATTTTGCACTTGTATGCCCTATTTCTCTTTTCAAAGGAGCATGAAGAGTTGGTGGGCATATATGCTTCTCAGCTTGCATGTCACCGTTGCATTGATCTCTTTGTGCACATGATGGAGCTTAGGCTGCACAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTACCATTTTCTTCTGTGGATGATTCCAAGGGAAATTTTGAAGACATTACTGAGAGAATTTTGGCAAGATCCCGAGAGATCAAGGTTGGCAAATACGATAACCTGTCAGATGTTGCAGAACAGCACAGACTGCAGAGTCTTCAAAAAGCTAAAGTCATCCAATGGCTTTGCTTTACACCACCATCAACAATTACAAATGTCAAAGATGTCAGTAAAAAGCTTCTTCTTCGAGCACTGGTTCATAGCAACATACTCTTCAGGGAGTTTGCTTTGATTTCTATGTGGAGAGTGCCAGCAATGCCTATAGGTGCCCACACAGTGCTTGGTTTCCTCGCTGAACCCTTAAAACAGTTTGCAGAAGCTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCTTGTGATGCAACCTACCGCAACTGGCTTAAAATTGAAGTGGAGAATGCAGAGGTTCCTGTCACTGAAATTTCACTTGAGGAAAAGGAAAGGTCCATTTCAGCTGCCAAGGAAACACTGAAGGCATCCCTTTCACTGCTACAAAGAAAAGAGACACCTTGGTTGGCTTCAACTGGTCGTATGTATGAGTCAGCTGAACCAGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCCTGCCATCTGGAGAATGTTTGTGTCCAGATGCTACTGTTTGTACTACACTTACAAGTGCTCTCTACTCTTCAGCTGGTGACGAGGTTGTCTTAAATCGACAACTAATGGTGAATGTTTCCATATCTTCAAGGGACAGTTATTGCATTGATGTTGTTCTTCGTTGCTTAGCAATTCCTGATGATGGACTTGAACCACATGAGCTCAATGATGGTGGTATTCTTGGCACCATCCTGGCTTCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACCATGGAAATATCCCGTTTGGATGCTTGGTATTCTGACAAAGATGGCCCCCTAGAGTGCCCGGCAACCTACATAGTGAAAGGACTTTGTCGTAGGTGCTGCCTTCCAGAAGTCATTCTTCGTTGTATGCAAGTCTCTGTTTCTCTAATGGGATCGGGAGTCCTGCCTGACTGTCATGATACTTTGATCGAGCTGGTTGGCAGTCCTGAAACTGACTTTCTTCACTTGTTTAGTCAACAACAATTACAGGAGTTTTTATTGTTCGAGAGGGAATACTCAATCTGCAAAATGGAGATTACAGAGGAATGA 3219 0.438 MAMDTSPNPGDSYFDPQNLSSRQQFRRYGKRHSTSGASIPPDNLASKLSETGLLYDGQSIHSPTNAALVLENIKQEVESLDADYLEEKTSYSTRRRLSADFPGVDPGFDSVRYSLKACKTEGDTLGDGADTIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNVRHRVVEDKLMRQKAQLLLDEAATWSLLWRGMKWSGSTTIVSGTSHVVACEFVAEDHTAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPNCGVWHHTQRYLKKGTLDMNVVHHLDFDAPTRENANLLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSIYPFGGLKQFPSVEVLVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGHADGSFEPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHESVTRQCKEQQRQIQMTLMLGNIPRVLDLIWSWIAPTEDNQNVFRPCGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVGIYASQLACHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSVDDSKGNFEDITERILARSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQFAEALETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIEVENAEVPVTEISLEEKERSISAAKETLKASLSLLQRKETPWLASTGRMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIPDDGLEPHELNDGGILGTILASGFKGELPRFQAGVTMEISRLDAWYSDKDGPLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVGSPETDFLHLFSQQQLQEFLLFEREYSICKMEITEE* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1323 1072 Pfam Nuclear pore protein 84 / 107 194 855 IPR007252 GO:0005643|GO:0017056
Pvu10g1323 1072 PANTHER NUCLEAR PORE COMPLEX PROTEIN 1 1071 - -
Pvu10g1323 1072 Coils Coil 70 90 - -
Pvu10g1323 1072 ProSitePatterns Zinc finger C2H2 type domain signature. 622 642 IPR013087 -
Pvu10g1323 1072 Gene3D - 692 883 - -
Pvu10g1323 1072 Gene3D - 271 420 - -
Pvu10g1323 1072 PANTHER NUP107-RELATED 1 1071 IPR007252 GO:0005643|GO:0017056
Pvu10g1323 1072 MobiDBLite consensus disorder prediction 24 44 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1323 K14301 - gmx:100786552 2002.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1323 10 39664221 39685176 Pvu10g1323 10 39664221 39685176 ECH