Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1317 ATGACTTCTGTTCTCTCCACTGCAACTTCATTGGCTACCCTCTCCTTCAATCATGGGGTCAGAACAACAACCACTCACCAAATGAAGAAACTGTCCACAGTGGGAAGCTCTGTATTTAGCGGGCTAAAACATATAAACAAAGTCCAGTTGAAAAAGGCAACAAAATGGACATTTGCATGCTCTGGTGGCATTAATAGTACAATCTCTTGTTCCATTGCTCAACAAGAAACTCTGCAAATTGTACAATGCACAATTGCGAAGCAACTTTCTATTGATGAAACCACTGTGACTCCACAAACTAAATTTTCAGAGTTGGGTGCTGATTCTCTTGACACTGTTGAAATCATGATGGCTTTGGAAGAGAAGTTTGACATTTCTATTGGAGAAGGTGGAGCTGAGAACATCTCTACCGTCCAAGATGCCGCTGATCTGATTGAGAAGGTGAAGACTGCTTCAACCTAA 462 0.4156 MTSVLSTATSLATLSFNHGVRTTTTHQMKKLSTVGSSVFSGLKHINKVQLKKATKWTFACSGGINSTISCSIAQQETLQIVQCTIAKQLSIDETTVTPQTKFSELGADSLDTVEIMMALEEKFDISIGEGGAENISTVQDAADLIEKVKTAST* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1317 153 Pfam Phosphopantetheine attachment site 81 145 IPR009081 -
Pvu10g1317 153 Gene3D - 70 149 IPR036736 -
Pvu10g1317 153 SUPERFAMILY ACP-like 74 148 IPR036736 -
Pvu10g1317 153 ProSiteProfiles Carrier protein (CP) domain profile. 75 149 IPR009081 -
Pvu10g1317 153 PANTHER ACYL CARRIER PROTEIN 35 152 - -
Pvu10g1317 153 Hamap Acyl carrier protein [acpP]. 76 149 IPR003231 GO:0006633
Pvu10g1317 153 TIGRFAM acyl_carrier: acyl carrier protein 75 147 IPR003231 GO:0006633
Pvu10g1317 153 PANTHER ACYL CARRIER PROTEIN 35 152 IPR044813 GO:0000036|GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1317 Pvu-Chr10 39633497 39634456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1317 68 148 Acyl Lipid Metabolism Gene Families AT5G27200 54.878 1.26e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1317 - - vra:106773102 229.565