Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1307 ATGGGGGTCTCCTTCAAGGTCTCCAAGACCGGCACTAGGTTTCGCCCCAAGTCAATTCCCCAACCGCACGAAGGCGCATCCGACAATTCCAAGTCCCAGAGTGGTCTTGTTGAGGCTGGTGAAAACATTGCTCAAATTCCCCAGTCATCTGCTTCATCTGAAACTCTTTCATTAGCAGAGAGGGAAGCTTCTTTCACATTGAACCTGTTTGCAGATGGTTATTCTATTGGAAAACCTTCAGAGAATGAGGCAGAAAATCATTCAAAATATCAAGATTTTCCAAAGTTGTTACACCCGTATGATAGGTCATCTGAAAGTCTTTTCCTGGCCATTGAGTCAGGTCACTTGCCTGGGGATATTCTTGATGATATACCTGCCAAATATGTTGATGGAGCACTAATATGTGAGGTGCATGATTATCGAAGATGCTCTTCTGAAAAAGGGAGTAGTGAGTCTGCAGAAAGTTCTCCTACTGTTAGCAAAGTATGCCTCAAGATGTCATTAGAAAATATTGTTAAGGACATTCCATCGATTACTGACAAGTCTTGGACATATGGTGATCTGATGGAAGTTGAATCAAAAATACTAAAATCATTACAACCAAAACTTCATCTAGACCCTACTCCAAAGTTAGATCGGCTGTGTGAAAGTTCACTTCCAACAAAGCTCAATTTGCCAAGAAAGCGATTAAGGAATATGCCAGAGTTTGCTGTTACTTCTACCAATAAAATTCATGGGAAGAAAGTATGCATAGATAGAGTGCAAGAAGGTTCAATTAGCAGGTTTGGTGATTCGGGAAACACTGTATCTAATGCTGTTGTACAGCAGACCCATGAAAATCAATCCATGCAAAATCTTAGTCCGAATGTTGCCATGGCCTTGAGACCTAAGAATTTTATACCTGATTCTTCCATCCCTAACTTTTCAATGATGTCCCATCAATCAAGATATGCAATGGCAGTTGGAAATCCAAGAAATTTGCAGGAGCAGGGACCAGTTCCTTCTATTAATTCATCAGGGGCTTCTCCTTCTGCACAAGATGTCTTGATTTCTTATGCTGATCATGCAAACTCAAGTACTTCTCTTCATGGAAAAAGGGATAATCAAGATGGACAAGCATCGCCTTTAACCAATATTGCAAAAAGAATGAGGCCTACATCTGCTGTTGAATCAATGCAGCATCAGCAAATAGGTTCACATGTTGAATCTCTTCAAGGACCAGATATGAATTGGCAGAATACATTGCAACAACAAGCTTTGGCCAGAGGTATTCCATATGGAAGTAGTAGCATTCAGAAGTTTTCTCAGCAGGTTTTCGAAGGGGGGATGAATCAAGAGATGGGGGCAGTTTCCTTTACTTCTGGTCAGCAGGGCATGAGATTGGTTGCAAAGGAAGAACAGTTTGAAATGGAAAAGGTAGATGGTGCAAAGACAAACCGCAATAAGAGTGAAATGGAAATGGAAACAAACATATTAGATCCACAACAGTTGCGGATTCAGCATCAGTTGTCACAGCATGCATTCATGAGACCTAATTTCCCTCAGGCAGCCTGGAACCTGAGTCAGCATATAGAGAAAGAAACAAAAAAAGATGACCAGCATCAGAAAAGGAAATCAGTTCAGAGCCCTCGGTTGTCGACTGGGGCATTACCTCACTCCCCATTATCTTCAAAATCAGGTGAATTTTCCAATGGTGCAGTAGGACCAAGTTTTGGACCATCTTCAATGGCTGCTGTGCCCGGTACATCACAAAAAGACAAGACATCAATGGTCTCGGTTCCTGCCACTGTTGGAACTCCATCAAATGATTCTACACAAAGACAACAGCAGGCACAACTAGCTGCAAAACGGAGATCTAATTCCCTTCCTAAGACTCCGGCAATGAATGGAGTTGGCTCTCCTGTTAGTGTTGGCACAACCAGTGTCCCACTGAATGCTAATAGTCCCTCAGTTGTGACCTCAGGTTTGGTTGATCAAGGCCTTCAAAATATGCTTGATCGGTTCTCAAAAATTGAAGTTGTGACAATGAGGCATCAACTTAACTTCAAGAAGAATAGGGTCGAGGATTTTCAAATGAAGAAGCAAAATGCATTTGTAACACAACATATAACACCACATCTTGCCAATTCAACTAGTAACGAGGGAGTGATAGACGATTCAATCTCTTTGTCAAAGTCACTTATAGGTGGGAGTATGAATGCGTGTAAAATGAGAATCATAACATTTTGTGTGCCTGAGCGTGTAGTTCAAGGAAATCATGTTTCTGTAGTTCCAAGGTTGCGAACTAGGATGATAATATTCGAGAAATCTGATGGTACTGTTGCTCTGTATTACGGGGATGCTGAAGAGGCTGATTACCTAGCTGCAGAGGATTATCTCCTCACATTACCCAATACTCATTCTGCGGATTTGCTTGCTCAACAGTTCTGTTCACAGATGATACACGAAGGATATGTGAAGGAAGATGACCGGATCCAACTTAAACCAAACCGTGTGAACCTTCCACTGGGCAATCAATCTACGCCTCCTAATAATTCTGTAGTTGAAATGCAACAATACGGAGAATCCGTACCTGGCCAGTCATCTAATGAAGTTGCAAAACCAGCTCCTGGAAATAATGCATCTATAAACCTATCTCAGAATCTTGTAACAAACCCAAGGATGTTGCCACCTGGAAACCCCCAAGCCTTACAGATTTCTCAAGGACTTCTCTCTGGTGTTTCAATGTCTTCAAGACCACAGCAACTGGACTCTCAACAAACTGTACAGCAGCAGCAGCAGCTGCAACAAAATCAACACACACTCATTCAACAGCAGAATCCCCAGTTCCAGAGATCTCCTATGATGCTTGGGACAAATCAGCTTTCACACTTAAATCCAGTTGGACAGAACTCCAACATGCCGTTAGGTAATCACATGCTCAACAAATCTTCGGCTCTCCAGATTCAGATGTTCCAACAACATCAACAGCAGCAGCAGCAGCAGCAGCCACAAATGCAAAGGAAAATGATGATGGGACTTGGACAAGCTATGGGAATGGGTAATTTGAGAAGTAACCTAGTTGGGCTTGCACCCATGGGCAATCCTATGGGTATGGGAGGTGCAAGGGGAGGAATAGGAGGAAGTGGAATCTCAGCACCAATGACATCTATTTCTGGCATGGGAAATACGGGTCAGAATCCTATGAATCTTAGCCAGACTTCAAATATTACTAATTCCATAAGCCAACAATTCAGGTCCGGATCGCTAAATTCCACATCTGCTGAGATTTTATCGAGGCTTAGATTGGTACAGACTCGTGGAAGCATGTTAGGTTCCCCTCAGTCCAACATAGCTGGCATCTCTGGTGCCAGACAAATGCATCCTGGCACTGCCAGTCTTTCAATGTTGGGTAGGGCTAATACAATGCAGCGGCCAATTGGACCTATGGGTCCACCAAAGATGATGGCAGGGATGAATCTTTATATGAATCAGCAGCAGCAGCAACAACAACAACCCCAACAACAGCAGCAACACCAACAGCAGTTACAAATTCAACAACAGTTGCAGCAGCAGCAGCAGCAAGAAACAAGTTCACAATTGCAGGCAGTTGTTTCTCCCCCACAAGTGGGATCTCCATCAATGGGAGTTCCACCATTGAACCAACAAACACAGCAGCAAGCAAGCCCTCAGCAAATCAGTCAACGAACTCCGATGAGTCCCCAAATAAGCTCAGGTGCAATTCATGCCATAAGTGCCGGTAATCCTGAAGCTTGTCCAGCAAGTCCACAGTTGAGTTCTCAGACCCTTGGCTCTGTTAGTAGTATAACAAACTCCCCTATGGATATGCAAGGTGTTAACAAGAGCAACTCTGTCAGTAATGCACAATGA 3870 0.4318 MGVSFKVSKTGTRFRPKSIPQPHEGASDNSKSQSGLVEAGENIAQIPQSSASSETLSLAEREASFTLNLFADGYSIGKPSENEAENHSKYQDFPKLLHPYDRSSESLFLAIESGHLPGDILDDIPAKYVDGALICEVHDYRRCSSEKGSSESAESSPTVSKVCLKMSLENIVKDIPSITDKSWTYGDLMEVESKILKSLQPKLHLDPTPKLDRLCESSLPTKLNLPRKRLRNMPEFAVTSTNKIHGKKVCIDRVQEGSISRFGDSGNTVSNAVVQQTHENQSMQNLSPNVAMALRPKNFIPDSSIPNFSMMSHQSRYAMAVGNPRNLQEQGPVPSINSSGASPSAQDVLISYADHANSSTSLHGKRDNQDGQASPLTNIAKRMRPTSAVESMQHQQIGSHVESLQGPDMNWQNTLQQQALARGIPYGSSSIQKFSQQVFEGGMNQEMGAVSFTSGQQGMRLVAKEEQFEMEKVDGAKTNRNKSEMEMETNILDPQQLRIQHQLSQHAFMRPNFPQAAWNLSQHIEKETKKDDQHQKRKSVQSPRLSTGALPHSPLSSKSGEFSNGAVGPSFGPSSMAAVPGTSQKDKTSMVSVPATVGTPSNDSTQRQQQAQLAAKRRSNSLPKTPAMNGVGSPVSVGTTSVPLNANSPSVVTSGLVDQGLQNMLDRFSKIEVVTMRHQLNFKKNRVEDFQMKKQNAFVTQHITPHLANSTSNEGVIDDSISLSKSLIGGSMNACKMRIITFCVPERVVQGNHVSVVPRLRTRMIIFEKSDGTVALYYGDAEEADYLAAEDYLLTLPNTHSADLLAQQFCSQMIHEGYVKEDDRIQLKPNRVNLPLGNQSTPPNNSVVEMQQYGESVPGQSSNEVAKPAPGNNASINLSQNLVTNPRMLPPGNPQALQISQGLLSGVSMSSRPQQLDSQQTVQQQQQLQQNQHTLIQQQNPQFQRSPMMLGTNQLSHLNPVGQNSNMPLGNHMLNKSSALQIQMFQQHQQQQQQQQPQMQRKMMMGLGQAMGMGNLRSNLVGLAPMGNPMGMGGARGGIGGSGISAPMTSISGMGNTGQNPMNLSQTSNITNSISQQFRSGSLNSTSAEILSRLRLVQTRGSMLGSPQSNIAGISGARQMHPGTASLSMLGRANTMQRPIGPMGPPKMMAGMNLYMNQQQQQQQQPQQQQQHQQQLQIQQQLQQQQQQETSSQLQAVVSPPQVGSPSMGVPPLNQQTQQQASPQQISQRTPMSPQISSGAIHAISAGNPEACPASPQLSSQTLGSVSSITNSPMDMQGVNKSNSVSNAQ* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 1252 1289 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 540 636 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 23 54 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 526 636 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 1192 1242 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 854 877 - -
Pvu10g1307 1289 Coils Coil 1169 1189 - -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 1192 1289 - -
Pvu10g1307 1289 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 1 1139 IPR021950 GO:0000124|GO:0003712
Pvu10g1307 1289 Pfam PHL domain 677 829 IPR046467 -
Pvu10g1307 1289 MobiDBLite consensus disorder prediction 1 54 - -
Pvu10g1307 1289 Pfam Spt20 family 61 213 IPR046468 -
Pvu10g1307 1289 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 1 1139 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1307 - - var:108347422 2041.54