Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1304 ATGGGCAGATATGGTGATTCGTTAAACGTGGATTTGGCTGCTGCAGTGAACAATCTTTTCCATATTCCTGAAACCGTGGAAAAGATCATTTTTCCTTCTTCTCGTGGCCCTGATCACCAGGAGAGCAGAGGAGTTTCTAGCATCATTCCAGTGGACATTTTGGACACTCAGAAGGAATTTATATTCTTCATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGACAGTTGAAGATGAGAACACACTAGTAATACGAAGCAATGGGAAGAGGAAACGCCATGAGGGAGAAGATGAAGGGTGCAAGTATCTGAGGCTGGAGAGGAGAGGGCCTCAGAATTTGCTGAGGAAGTTCCGTTTGCCTGAGAATGCCAATGTGTCTGCAATCACAGCTAAATGCGAAAATGGGGTTCTGACTGTAGTTGTTGGGAAGCACCCTCCTCCAAAATCCAAATCCGTTCAAGTTGCTATTGCTTGA 480 0.4521 MGRYGDSLNVDLAAAVNNLFHIPETVEKIIFPSSRGPDHQESRGVSSIIPVDILDTQKEFIFFMDVPGLSKSEIQVTVEDENTLVIRSNGKRKRHEGEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKCENGVLTVVVGKHPPPKSKSVQVAIA* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1304 159 Gene3D - 12 158 IPR008978 -
Pvu10g1304 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 159 - -
Pvu10g1304 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 159 IPR002068 -
Pvu10g1304 159 SUPERFAMILY HSP20-like chaperones 39 158 IPR008978 -
Pvu10g1304 159 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 13 159 - -
Pvu10g1304 159 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Pvu10g1304 159 CDD ACD_sHsps-like 52 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1304 Pvu-Chr10 39534813 39535990 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1304 K13993 - gmx:100799280 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1304 10 39534813 39535990 Pvu10g1304 10 39534813 39535990 ECH