Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1301 ATGGATTCAAATTCAACAAAGGAGAAGCTGCAGAGCAGTGCTTCTGTTGCAGATGGAGCTGACCTTAAGCCTTGTTATATGCAGAAGTTCAGGCTCTATGAGACTCGCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACTGTTTGGAGGATCTTAAAGATTGACAGATTGGAGCCATCTGAATTGAATATCGTTGAAGATTCAACAATATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGATACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATATTACATGCTGCTTATAACAAAGAGAAGGAAGATCGGCACAATCTGTGGTCACAATATATATGCTGTCACAAAGAGCGAAATGGTTCCAATTCCACATTCTACTGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTCGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGTTTAGTCTTCAACGCAACTTATCTGATCATAACACTACAGGGCAATCACTCTATGAAACCCTTTTTGTTTGGAATGAGTTCTTGACTCGTGGGATCAGGAATAATCTCCAGAATACTTCATGGACTGTAGCCTTAGTATATGGCTTTTTTAAACAGGTCAAACTTTCTATATCTGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTAAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTACAGAAGCTCGTGATGGACACCCTATGCAAATCAGTTCTGTGGTGCAGATCAGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCGGACATTATATTATCAAGAAAGGACTCTAATTTTGAGGCCACAAGACTTCATTTTGATAATCTTGTCAAAAGATATGGAAATCCAATTATTATACTGAACTTGATAAAGACACGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAACCGAGTTTGCAAATGCTGTTAGGTCTATTAATAAAAATTTGAGAGGGGAAGATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTGTTGGGACAGCTGGGAAAAGTGGCTGCATACGCTCTGAAGCTGACTGGCATCTTCTACTCTCCAGTGACACCAAATATGAGGCTAGATAGATTATCCCAGTATTCCTACTCTGAGAATAACAATGTCAATGATCACTGCATTACAGAAGAAGCCAGCATAAATAAGAATAACGTTGATAAAGAAACAGAAATTAGCAATTGTTATTGTAGAGATGATGAGAACAAAGATTACAGTGTCAAACCCCAAACACTTCAATCTGGGGTGTTGAGGACTAACTGCATTGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTACGGACTGGCTGCACTTGGAGGTCAGCTTCAAGTTTTAGGATTTATTGAATCCCCACATATTGATCTTGATAACCCTTTGGCCGAGGAATTAATGGAAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAACAAGATATTTTCCGAGAGAAGAGGTCAATGGAAGGCAGCAACACAGTCCCAGGAGTTTATTCGAACCCTTCAGCGTTATTACAACAACACATATTTAGATGGTGATAAGCAAAAATCAATTAACTTATTCTTGGGGCATTTTCAGCCACAGCAGGGAAAACCAGCACTGTGGGAGCTAGATTCAGATCAGTATTACACTGTCAAGAGACATGGCCTTTATTTAACAGATGGCAGCATTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTCGGTGAAAGTGACACTACAATTAGGAACTTGAATGATACAAATCGTCAGAATTCATCTGAAAAACCTGATAAGCGTTTCCTTTCGGGGTCTACTCCAGATATATTTACTTGTGGAAGTGATGTTTGTCATTGCAGGCAGATATATGGAGGAATGATCAAGGGCCAAAATTGTGAGAGTGGTCATATTTGTTTCGGCGAACATGGAGATGCATGTGATTGCTCCAATTTCCTTGATGTGGAGTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAGAGGTCGACCAGCATCTCCTCGGAGAATATCCTGAATGAACTAATAACTACTGAGACATCTGCTAGTGAATCTGGATCCAGTCTTAAGGGAAGGCATAGTGGAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAAGGTTTGAACGTTGGGTAAATGAAGAAGAGTTGCATTTTGTTTGGACAATATAG 2451 0.4019 MDSNSTKEKLQSSASVADGADLKPCYMQKFRLYETRSKFYMIGRDKNRTVWRILKIDRLEPSELNIVEDSTIYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAVTKSEMVPIPHSTVRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMFSLQRNLSDHNTTGQSLYETLFVWNEFLTRGIRNNLQNTSWTVALVYGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQIRGSIPLFWSQEASRLNIKPDIILSRKDSNFEATRLHFDNLVKRYGNPIIILNLIKTREKKPRETILRTEFANAVRSINKNLRGEDRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMRLDRLSQYSYSENNNVNDHCITEEASINKNNVDKETEISNCYCRDDENKDYSVKPQTLQSGVLRTNCIDCLDRTNVAQYAYGLAALGGQLQVLGFIESPHIDLDNPLAEELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQKSINLFLGHFQPQQGKPALWELDSDQYYTVKRHGLYLTDGSIRSTITRSLSDGNILGESDTTIRNLNDTNRQNSSEKPDKRFLSGSTPDIFTCGSDVCHCRQIYGGMIKGQNCESGHICFGEHGDACDCSNFLDVEWLSSSGNSCEEELLERSTSISSENILNELITTETSASESGSSLKGRHSGEELNKDRKYSERFERWVNEEELHFVWTI* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1301 816 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 2 813 IPR043573 GO:0043813|GO:0046856
Pvu10g1301 816 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 2 813 - -
Pvu10g1301 816 ProSiteProfiles Sac phosphatase domain profile. 166 561 IPR002013 GO:0016791
Pvu10g1301 816 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1301 Pvu-Chr10 39509379 39520448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1301 27 805 Acyl Lipid Metabolism Gene Families AT5G20840 56.790 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1301 K22913 - gmx:100806380 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1301 10 39509379 39520448 Pvu10g1301 10 39509379 39520448 ECH