Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1300 ATGGCTTTGCGAGGGGTTTGGCAACTTCAGAAGCTGATTGTCAGTTATTGTAACTGGGGTGGAAGTAGCAGAGGTATAAGGGCATTTATGGAGTCTCAGTTGCCAATGCTTAAGGAGAAGAATCCTCAGTTAGAGGTGGTCACTGAGCTCATCCGTGGCCAGCATCCTCATCTGAAGGGTTTTTACAAGAACAAAAACCAGCGAGTGATATGTGTGAAGAATATGGATCCAGAAGACATACTTTTGCATGCAACTAGGCTAAGGAATGCATTGGGCAGAAAGGTAGTGAAATTGAGGACAAGACATGTAACCAAACACCCTAGTGTGCAAGGAAAGGGGTGTGATGGTGATTTCCAACTCAAGAACGAATCACATAAGAGAAGATGGAGGCTTCTTCTTCCTGCACCCCTACTTTTTTCTTCCTGCACTCCTCTAATTTTCTAA 444 0.4414 MALRGVWQLQKLIVSYCNWGGSSRGIRAFMESQLPMLKEKNPQLEVVTELIRGQHPHLKGFYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGKGCDGDFQLKNESHKRRWRLLLPAPLLFSSCTPLIF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1300 147 Pfam Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 26 76 IPR007741 -
Pvu10g1300 147 Gene3D Glutaredoxin 1 113 - -
Pvu10g1300 147 SMART L51_S25_CI_B8_2 18 91 IPR007741 -
Pvu10g1300 147 SUPERFAMILY Thioredoxin-like 8 90 IPR036249 -
Pvu10g1300 147 PANTHER 39S RIBOSOMAL PROTEIN L43 1 112 IPR039927 GO:0003735|GO:0032543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1300 Pvu-Chr10 39489445 39494257 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1300 K17424 - gmx:100778783 218.779