Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1299 ATGAAGTTCACTGTGTTCTTCCTCATCTTCTTCTTCTTTGCTTCTGTGTCTCATATCCATGGAAGCATGAAACATGCTCCCCTCTTCATTTTTGGTGATTCTTTCTTAGATGCTGGCAACAACAATTACATCAACACTACAGCACTTGACCAAGCAAATTTCTGGCCCTATGGGGAAACATACTTCAAGTTCCCAACAGGGAGATTCTGTGATGGACGGCTGATATCAGATTTCATAGCTGAATATGCAAACCTGCCATTGGTTCCACCATATTTAGAACCTGGCAATAGGCAATACTATGGAGGAGTGAATTTTGCATCTGGTGGAGCTGGTGCTCTTGTTGAAACTTTTGAAGGGTCGGAAATATACAAGAGAGGGGCTAGAAAATTTGTGTTCATGAACTTGCCACCCTTGGGTTGTCTTCCAGGCACTAGAATAATTCATGCAGAAGAAAATGGTAAATGCTTACAACAACTTTCAGCCCTTGCAAGTTTACACAATAGAGTTCTGCATGTGGTTCTCTTGCAATTGGAGAAGCAATTAAAGGGCTTCAAATTTGCACTATATGATTTCAGCACTGATCTCACTCAAATGATCAACCATCCCTTCGAATATGGTTTAAAGGAGGGAAAATCTGCATGTTGTGGAAGTGGAGCATTTAGAGGAGAATATAGCTGTGGAGGGAAAAGAGGGCAGAAGGAATTTGAACTGTGTAAGAAACCCAATGAGTATTTATTTTGGGACTCTTATCATCTCACAGAAAGTGCTTACAAGAACTTGGCAGATCGTATCTGGGGTTTTACCAACAGCTCTTACAATATAGGGCCTTACACTGTCAGAGATCTCTTTCAACTTCCATGA 861 0.41 MKFTVFFLIFFFFASVSHIHGSMKHAPLFIFGDSFLDAGNNNYINTTALDQANFWPYGETYFKFPTGRFCDGRLISDFIAEYANLPLVPPYLEPGNRQYYGGVNFASGGAGALVETFEGSEIYKRGARKFVFMNLPPLGCLPGTRIIHAEENGKCLQQLSALASLHNRVLHVVLLQLEKQLKGFKFALYDFSTDLTQMINHPFEYGLKEGKSACCGSGAFRGEYSCGGKRGQKEFELCKKPNEYLFWDSYHLTESAYKNLADRIWGFTNSSYNIGPYTVRDLFQLP* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1299 286 Gene3D SGNH hydrolase 17 120 IPR036514 -
Pvu10g1299 286 Gene3D SGNH hydrolase 121 274 IPR036514 -
Pvu10g1299 286 CDD SGNH_plant_lipase_like 28 265 IPR035669 -
Pvu10g1299 286 Pfam GDSL-like Lipase/Acylhydrolase 121 264 IPR001087 GO:0016788
Pvu10g1299 286 Pfam GDSL-like Lipase/Acylhydrolase 28 112 IPR001087 GO:0016788
Pvu10g1299 286 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 121 284 IPR044552 -
Pvu10g1299 286 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 17 121 IPR044552 -
Pvu10g1299 286 PANTHER GDSL ESTERASE/LIPASE 5 121 284 - -
Pvu10g1299 286 PANTHER GDSL ESTERASE/LIPASE 5 17 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1299 Pvu-Chr10 39483587 39488736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1299 118 265 Acyl Lipid Metabolism Gene Families AT4G10950 27.027 2.62e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1299 - - pvu:PHAVU_010G124800g 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1299 10 39483587 39488736 Pvu10g1299 10 39483587 39488736 ECH
Pvu10g1299 10 39483587 39488736 Pvu9g2708 9 37369370 37370867 PCT