Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1286 ATGGATGCACTGGACAAGACATTTTCTGAGCTTGTCAGCATCGTCAAAACGTTGTGTGCCTGGCGATCTGAACCAGCAAATGTGTCTAGGGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATTCACAGTTCACCTTGTTTAACCGTAAACACCACTGTCGTTTATGTGGACGGATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCTGTTTGGATAATAGTTGAAAAAGATTCATGTACAACAAACAAGAGTGCATCAAACAAGCTTGAGTTGGAAAAGATTCGTGTGTGTAATTATTGTTACAAGCAATGGGAGCAAGGTGTAGTTGCTTTTGATAACAGTATTCCGGTTTCCAATCTGGATAATATTGCTTCAGCCTCAACTTCAAGCTTGAATAGCACTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCTTATTCAGTTGGGTCTTATCAACAAATGCAACAGGGTTCTGTTCTAAACCTGCATAAATTACCTCTGAAGGGAAAAGACGCGGATACTGATAGGGAAGGCTTATCAGCATTAGGAGGGAGGAATGATCTTGTAGCAGATCTGGGTGATCCATTACCAAACCAATGCGGATTCGCAATTAATAGGACTGATGATGACGAGGATGAGTATGGTGTGTATCGGTCAGATTCTGACACGAGGCATTATCCTGAAGTGAATAACTACTATGGACAGGCTGAGTTTGATCGGATAGGCCTCATTGATGGCTCACTGAAAGTGGATCCTGATGGAGAAAACATTGATGCAAAACTCCCTTCAAACTATAGTTTTGACACTGATACACAGGGTTTGGAAGGAGCCCCCATTATAGCAAAACATGAAGATGAACCTGATATCTGTGATGAAAATGAAGCCCCTTCCTCATTATATGTCTCAGAGGACGTTGATGCTGAACCTTTTGATTTTGAAAATAACGGACTTCTCTGGCTCCCTCCTGAACCAGAAGACGAAGAAGATGAACATGAACCTATTTTGTTTGATGATGATGATGATGATGATGGGAATGTCATTGGAGAGTGGGGATATCTACGCAGTTCTAGCAGTTTTGGAAGTGGTGAATCTCGACAGAGAGATAGATCAAATGAGGAGCAGAAGCAGGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAAGTTGAGAACCTAGCTGTTGAAGATAATGACGAGAACAGTTGGTTGGAGATTGTCACATCTCTGTCATGGGAAGCGGCTACTTTATTGAAACCAGATATGAGCAAAGGTGGAGTCATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCGTGTGGGAATCGTAATGAAAGTGTGCTGGTTAAAGGAGTTGTTTGTAAAAAAAATGTGGCTCATCGGCGAATGACATCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTAGAGTATCAGCGTGTGACCAACCTTTTTTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCTGTGGCAAAGATAGCTTCGCAGCAGCCAAACATGTTGTTGGTGGAGAAATCAGTCTCACGATATGCACAGGAATATCTTCTTGCAAAAGACATAACTCTGGTTCTTAATGTCAAGAAACCACTTTTGGAGCGTGTAGCACGTTGCACAGGTACTCAAATAGTGCCTTCAATCGATCATCTGTCATCGCAAAAGTTGGGTCACTGTGAATCAGTTCATGTTCAGAAGTTTCTTGAAGACCTAAACAATGTTGGTCAGGGTGGGAAAAAAACATTGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTTGGTTTCACTATTTTACTAAAAGGGGCCGACAAGGAGGAGTTGAAGAAGGTAAAGCATGTGGTTCAGTACGGAGTTTTTGCAGCTTACCATTTGGCTATGGAAACATCTTTTCTTGCCGATGAAGGAGTATCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCAGATCAAGCATTAGCCATTCAGAGGTCCATTTCAACAGTTCCGGGTTTTGGTATTGCTGATAATGAAAAGCCTCAAGGGCACGAACCTGACACTGGACCGCGAAGAACCAAAAGTGTCACAATTGCTGAACTAACATCTGCAACCTGCAGTTCAGAGCCATGTGTGTCTAATGGTGCTTCTCAATTGATGCCACTTGGATCAAGTCTCAACCATTCAACTGCCTTTTACTCCTCCATTGTTTCTTCAGAAAATTCAATTCCCGAATCACACCATAATATGCTTCTTCCATGCACTAGCAGAGATAGAAATGGAATGGACTCCAAACAACCTATGGTGGAAGAAACTTCTCCAGTGGACGACACCCTGGTTATTGAGGATGATCCTACTGCAGAAGACCCTGGAACTTCAGAGAAATTATATCAAGGCATGTCAACGGACACTCCACAAAATGGTGATAGCAAAATCTCTACAAACCAGTTAATTGAGTCAGGATCTTTATCTCCAAAAGATGGTCTAAACCATCCCGAGAATATTGAAATCATAAATGAAGAGTTTATTCTTGAAAAAGAAGAGTTTCCTCCATCTCCGTCTGATCATCAAAGCATTTTGGTTTCTTTGTCCTCTCGGTGTGTATGGAAGGGAACTGTGTGTGAGAGGTCCCATCTCTTTCGAATTAAATACTATGGCAGCTTTGATAAGCCATTGGGTCGGTTTCTGCGGGACCACTTATTTGATCAGAGTTATCGATGCCATTCTTGTGAAATGCCATCAGAAGCACATGTGTATTGCTATACTCATCGTCAGGGAACACTTACCATATCAGTTAAGAAACTACCAGAAATTATCTTACCCGGGGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGGATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTCGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCATTACACAGAGATTGTCTTCGATTTTATGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCCATTGATGTTCACTCTGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGATTGGATACAGCAAGAATCAGATGAGGTGGTCAACCGGGCAGAACTTTTATTCTCTGAGGTACTCAATGGTCTTAGTCAAATTGGAGAGAAAAGATCTAATGCTGGCCAATTAAGACGTCAAGTTACTGAACTAGAGGGCATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCGAAAGATTTTGAATCAAGAAAAGAGAAATGGCCCACCGGGGATTGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTAATTTTTCAATCATATATGTGGGATCACCGTCTTATTTATGCAGCGAACTTAGTCAATTCCAATAATGGATCTGGTTCAAGCAGTCCAGTTTCCGAAGATAAGGAGAAACCTGTTGATGAAAATCAGATCAGTATCAACTCTATTCATGGTGGTCCAAAGGTTAATGAAAATCCTTGTCTTGGAGGAGGAAGTGTCGTAGTTGATGGCAAACTTTCACAAGATGATGCATTGCATCAAGAAAGCGAGATGGCCAAAAAGGAAAATCATGAGAAAGGTGAGGGACCTGTTTCAAACAGCAAAAGCATAAATGATCAATCTGGTCTCTTAGAACCTGAATTGGGTGTTCTTAGAACTCTATCAGATGGGCCATTTCCGGTCATACCTAGTTTGTCTGAAACACTTGATGCAAAATGGACGGGTGAAAATCACTCTGGATTTGGAGCTCAAAAGGATAACAGCTTTGTGAATCCCGATATACATTTGGCAGATAGTTCCATGATCAGTGTACAAAAAGAAACATATTATGTAGGGGATCGTACAGAAGATCAAAATGGTTCCAAGAGTTTCTATTCTTCTTTCAAAGGTCATGATAATATGGAAGAGTCTTCGAGCTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAAAAACCTTTTTGCCAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTACATGTCATCTTTCCGGAAGCAGGAACTCCAGGGTGGGGCAAGGCTTCTTTTGCCAATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACTCTCTAGTGTTATAGCTTATGCCTTAATGTCACCAGAATATCACTTCCAATTGACTGATGAAGGAGAAAGGCCACGAGAAGGAAATGAGTTCACTTCATCATATTTTTCTGACTCAGGCACCTTCCAGTCATTCTCTTCTGTTGATGAAACAGCCTTTGATTCTCAGAAAAGTTTTGGATCGATAGAGGAAATGATACTTTCCATGTCTGGGTCTCGTAGTTCATCAATGTTAGATCCAATGTTACATACCAAGGCTATGCATGCCAGAGTTTCCTTTGGAGAAGACGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGTTTTGAAGCCTTAAGAAGGGTGTCTTGTCCTTCTGAGCTTGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTTTTTGCAAAAACATTGGATGATCGATTTATTATCAAACAAGTTACAAAAACAGAGCTTGAATCATTCATTAAATTTGGTCCTGAATACTTCAAGTATCTTTCTGAATCCATAGCCACTGGAAGTCCGACATGTCTGGCAAAAATTCTTGGCATATACCAGGTTACATCGAAGCATACTAAAGGAGGGAAAGAGTCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTATAGGAGGACTGTAACACGACTTTACGATCTCAAAGGATCTTCCAGGTCTAGGTATAATGCAGATAGTACTGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCAAAACGATCTTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGATGTTATGGACTATTCTTTACTAGTTGGGATGGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATACTTGGGGGACCAAAGAACACACCTCCAACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAGTGGTCTCCTCCTTCTATGGCTGCTAGTAATTCTCAGTCTGATTTAGGTGAAGACAACCCACACTTTAGGACCCCAGCTGAATGA 5493 0.4153 MDALDKTFSELVSIVKTLCAWRSEPANVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPVWIIVEKDSCTTNKSASNKLELEKIRVCNYCYKQWEQGVVAFDNSIPVSNLDNIASASTSSLNSTKTSATANSSNITLCSMPYSVGSYQQMQQGSVLNLHKLPLKGKDADTDREGLSALGGRNDLVADLGDPLPNQCGFAINRTDDDEDEYGVYRSDSDTRHYPEVNNYYGQAEFDRIGLIDGSLKVDPDGENIDAKLPSNYSFDTDTQGLEGAPIIAKHEDEPDICDENEAPSSLYVSEDVDAEPFDFENNGLLWLPPEPEDEEDEHEPILFDDDDDDDGNVIGEWGYLRSSSSFGSGESRQRDRSNEEQKQVMKNVVDGHFRALVSQLLQVENLAVEDNDENSWLEIVTSLSWEAATLLKPDMSKGGVMDPAGYVKVKCIACGNRNESVLVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLFSSVDTLLQQEMDHLKMAVAKIASQQPNMLLVEKSVSRYAQEYLLAKDITLVLNVKKPLLERVARCTGTQIVPSIDHLSSQKLGHCESVHVQKFLEDLNNVGQGGKKTLKTLMFFEGCPKPFGFTILLKGADKEELKKVKHVVQYGVFAAYHLAMETSFLADEGVSLPEIPLNSLALPDQALAIQRSISTVPGFGIADNEKPQGHEPDTGPRRTKSVTIAELTSATCSSEPCVSNGASQLMPLGSSLNHSTAFYSSIVSSENSIPESHHNMLLPCTSRDRNGMDSKQPMVEETSPVDDTLVIEDDPTAEDPGTSEKLYQGMSTDTPQNGDSKISTNQLIESGSLSPKDGLNHPENIEIINEEFILEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVYCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSQIGEKRSNAGQLRRQVTELEGMLQKEKLEFEETLRKILNQEKRNGPPGIDILEINRLWRQLIFQSYMWDHRLIYAANLVNSNNGSGSSSPVSEDKEKPVDENQISINSIHGGPKVNENPCLGGGSVVVDGKLSQDDALHQESEMAKKENHEKGEGPVSNSKSINDQSGLLEPELGVLRTLSDGPFPVIPSLSETLDAKWTGENHSGFGAQKDNSFVNPDIHLADSSMISVQKETYYVGDRTEDQNGSKSFYSSFKGHDNMEESSSWLGMPFLNFYRQFNKNLFASTQKFDTLVDYNPVYMSSFRKQELQGGARLLLPIGVNDTVIPVYDDELSSVIAYALMSPEYHFQLTDEGERPREGNEFTSSYFSDSGTFQSFSSVDETAFDSQKSFGSIEEMILSMSGSRSSSMLDPMLHTKAMHARVSFGEDGPLGKVKYSVTCYYAKRFEALRRVSCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIATGSPTCLAKILGIYQVTSKHTKGGKESRMDVLVMENLLYRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRSLERAVWNDTGFLASVDVMDYSLLVGMDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSMAASNSQSDLGEDNPHFRTPAE* 1831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 702 722 - -
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 1243 1267 - -
Pvu10g1286 1830 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1820 - -
Pvu10g1286 1830 Gene3D - 1656 1798 - -
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 1808 1830 - -
Pvu10g1286 1830 CDD PIPKc_PIKfyve 1534 1797 IPR044769 GO:0000285
Pvu10g1286 1830 SMART fyve_4 28 114 IPR000306 GO:0046872
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 366 388 - -
Pvu10g1286 1830 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 113 IPR017455 -
Pvu10g1286 1830 Coils Coil 1110 1144 - -
Pvu10g1286 1830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 118 IPR013083 -
Pvu10g1286 1830 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1488 1654 IPR027484 -
Pvu10g1286 1830 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1573 1739 IPR002498 GO:0016307|GO:0046488
Pvu10g1286 1830 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1820 - -
Pvu10g1286 1830 SUPERFAMILY FYVE/PHD zinc finger 31 114 IPR011011 -
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 824 838 - -
Pvu10g1286 1830 Gene3D GroEL 465 638 IPR027409 -
Pvu10g1286 1830 SUPERFAMILY GroEL apical domain-like 466 638 IPR027409 -
Pvu10g1286 1830 CDD Fab1_TCP 401 672 - -
Pvu10g1286 1830 MobiDBLite consensus disorder prediction 810 838 - -
Pvu10g1286 1830 Pfam FYVE zinc finger 33 112 IPR000306 GO:0046872
Pvu10g1286 1830 SMART PIPK_2 1507 1798 IPR002498 GO:0016307|GO:0046488
Pvu10g1286 1830 SUPERFAMILY SAICAR synthase-like 1530 1797 - -
Pvu10g1286 1830 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1473 1797 IPR002498 GO:0016307|GO:0046488
Pvu10g1286 1830 Pfam TCP-1/cpn60 chaperonin family 405 663 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1286 Pvu-Chr10 39352414 39362255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1286 2 1830 EF-hand Containing Proteins AT3G14270 58.707 0.0 2034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1286 K00921 - gmx:100819364 3131.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1286 10 39352414 39362255 Pvu10g1286 10 39352414 39362255 ECH