Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1284 ATGGACCTTCCCAACCACAAATTCTTCCAATCTCCGTCTGCATTGGCAGTGGCAGTGGCACCACATGGGGAAACACTCACTGAGAGCAATATGAACATGTATGGGAAAAGCAAAGACAACCCTTTTGCAGATGACTTCCCTGATCCACTTTGCAAGCTCAACCTGAAGGAAACCTCTGAGTTTGTCAAGTCGTTGCCTGTGCCGAGTGGCAGAGCCGAAAGCAGAGGCCACTCTGTTTCACAACAGAGGAGACTATTAGAGGCTCCCTCCACTCCGGGGAGACCAGTTTTCTCCTTCAGCTCTGGCCTTCCAAGAAAGAGCTTCCCTTCTAAGTGGGATGATGCAGAGAAATGGCTCATGAGCACTTCTTGCCACGACTCACCTGCTCACAACAACAACAACACTCTCAAGGTTTCAGTCTCAGACTCCTCAAAGGTTGCAACCAGACAACCATACGAAGATGTTACCTTTAAGCAGCAAATGGAAAATTTCTCGGAGAAATCTAGGGTCACTGAAGAAAGGGTGACCAAAGCTGTCCCCAACTTTCACTGGTCTCCTTCATTGGACCACCACCATAACACACTCGGCGCTTTCCATGGTGTTAAAGACATTGTACTCAAAGATAAGTTCACAGACAGCATAGAACCTATTTTGCCAAATTTGAGATATTTAGAGCCGGCTAAGGAAGGGTTCTTGTTTAGGAACCAAGGTGGTGGGGCAATGCAAGATGCTTGCACAGAAGTGGTTCAACATAGAGACATTGGCACTGAGATGACTCCTCTGGGAAGTTCCACAACTTCAAGATGCCACACCCCAGTTAAGATTTCATCACCTCCTCGGCACAACACTCCTGCAAGTAGGTCAGGACCATTGGCCTTGGCTAGCACTGCCTGCACTCTTGATGTCATTCAGCTGGAGGAGTGCCATTTTTCTAAACTGCAACTAGGATCACAGTATGATATAGTAACTTCAAATTGGAGCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGCTTGAGGCATAATGGGAGCCACAAAGCTGATTCCGACTGCATAGCTGCTTCATGGGAAGAAGAGGAGAAGACCAAGTGTTGTTTAAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAGTGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAGATCAAACCTTGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAGGAGTGGAGAGCAGAAGCAAGACAGCAACACTTGGAGCAAATACAGAAAACCACTGAGCAAGCTCAAAAGATGATTCATAAACATAACTCACACTTTTCAAAGCCAAGTTCATGTGGTTGCTTCCCTTGCAACAACAACCATCATTGA 1410 0.4589 MDLPNHKFFQSPSALAVAVAPHGETLTESNMNMYGKSKDNPFADDFPDPLCKLNLKETSEFVKSLPVPSGRAESRGHSVSQQRRLLEAPSTPGRPVFSFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHNNNNTLKVSVSDSSKVATRQPYEDVTFKQQMENFSEKSRVTEERVTKAVPNFHWSPSLDHHHNTLGAFHGVKDIVLKDKFTDSIEPILPNLRYLEPAKEGFLFRNQGGGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALASTACTLDVIQLEECHFSKLQLGSQYDIVTSNWSSSEEEEKEISKSLRHNGSHKADSDCIAASWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIQKTTEQAQKMIHKHNSHFSKPSSCGCFPCNNNHH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1284 469 MobiDBLite consensus disorder prediction 66 98 - -
Pvu10g1284 469 PANTHER OS11G0616300 PROTEIN 17 465 - -
Pvu10g1284 469 MobiDBLite consensus disorder prediction 257 288 - -
Pvu10g1284 469 PANTHER OS02G0116800 PROTEIN 17 465 - -
Pvu10g1284 469 Pfam Remorin, C-terminal region 354 450 IPR005516 -
Pvu10g1284 469 Coils Coil 384 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1284 Pvu-Chr10 39337366 39341875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1284 - - gmx:100776089 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1284 10 39337366 39341875 Pvu10g1284 10 39337366 39341875 ECH
Pvu9g2703 9 37350848 37353105 Pvu10g1284 10 39337366 39341875 PCT