Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1283 ATGCGGAAAATCGCTGCAGACAGATTCAGGCGCCTTTTCAATCGTTCACTTCTTCTTCTTCCTCGCCACAGTCACAATCACCCTCCCTTTCCTGCTTCTTCCTCTATCTCTTCTCACTCTCTGTTTTCCCCCTATCGCTTCTTATTTTCTACTCCGTTTTCTTCCATGGCCTCTGATTCCCCTTTCCCAGTCACCGCTCAAAACATCAACCCCAAGGTTCTGGAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAGGATTTACAGGCCAATCCCGGTTCTCATCCATTTGACGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGGCTCCAATAACTTTTTTCCGAGAGGTTCTTGCTTTATCTGATCATCCAGCTTTATTGGACAAAAGTGAAACCCAGGGTTTGTTCAGTGCTGATGCAATAGAACGAGCTTGGCAGATTGTGGAACAGATTCCCGGTAGAGCAACTGGTGCCTATAGCCACAGTCAGGGTGTCAAGGGTTTACGTGATACAATAGCGGCTGGGATTGAAGAGCGTGATGGTTTTCCTTGCAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCGGCAGTCCATAACATGATGCAATTACTCATTAGATCAGAAAATGATGGTATTCTGTGTCCCATTCCACAGTACCCTTTGTACTCGGCCTCAATTACCCTCCATGGTGGATTCTTGGTACCTTATTATCTAGATGAAGCAACCGGTTGGGGGTTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATCAGTGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTGCTGAGGAAAATCAGCGCAATATAGTAGATTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTCCCTGAGAAGAAATTTCACTCATTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGACATCACCTTAGTATCCTTTCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTACATGGAGGTGACTGGCTTTTCTGCAGACGTAAGGGAACAAATATACAAAATGGCATCTGTCAACCTTTGCTCTAATATATCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAATCATACATGGCTGAGAAGGGAAATATTTTGGAGTCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAGCTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGCCTGTCCCAAAAGGCTATCAAAGCTGCAGGGGATGAAAATACTTCACCTGATAACTTCTATTGCAAGCGCTTGCTTAATGCAACAGGAGTAGTAGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGGTGTACCATTTTGCCTCAAGAAGAAAAGATTCCAGCTATTGTCTCCCGTTTGACAGAGTTCCATGAAAAATTTATGGATGAGTTCCGTGACTAA 1626 0.4465 MRKIAADRFRRLFNRSLLLLPRHSHNHPPFPASSSISSHSLFSPYRFLFSTPFSSMASDSPFPVTAQNINPKVLECEYAVRGEVVTLAQNLQKDLQANPGSHPFDEILYCNIGNPQSLGQAPITFFREVLALSDHPALLDKSETQGLFSADAIERAWQIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPCNPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASITLHGGFLVPYYLDEATGWGLEIPELKKQLEAAKSKGISVRALVVINPGNPTGQVLAEENQRNIVDFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSADVREQIYKMASVNLCSNISGQILASLVMSPPKVGDESYESYMAEKGNILESLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDENTSPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMDEFRD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1283 541 Coils Coil 427 447 - -
Pvu10g1283 541 Gene3D - 169 415 IPR015421 GO:0003824
Pvu10g1283 541 Gene3D - 118 168 - -
Pvu10g1283 541 CDD AAT_like 154 530 - -
Pvu10g1283 541 PANTHER ALANINE AMINOTRANSFERASE 56 540 IPR045088 GO:0008483
Pvu10g1283 541 Pfam Aminotransferase class I and II 165 520 IPR004839 GO:0009058|GO:0030170
Pvu10g1283 541 PANTHER ALANINE AMINOTRANSFERASE 2 56 540 - -
Pvu10g1283 541 Gene3D Aspartate Aminotransferase, domain 1 67 539 IPR015422 GO:0003824
Pvu10g1283 541 SUPERFAMILY PLP-dependent transferases 67 535 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1283 Pvu-Chr10 39329309 39335736 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1283 K00814 - gmx:100127413 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1283 10 39329309 39335736 Pvu10g1283 10 39329309 39335736 ECH