Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1281 ATGAGAGAGCCTACTGATGGAGCGAGCAAGCCCTCCAAAACCTCATCGTCGGGTACAACCTTCCCTCTCATTCTCGACATCGACGATTTCAAGGGAGACTTCTCGTTTGACGCGTTGTTCGGGAACCTCGTCGGCGAGCTTCTTCCGTCCTTCAAATTGGAGGAAGCGGAAGCGGACGGCGGCGAGCCGAACGGGCATATCCGAGCGCCGTCCGATGCGGCCAAGTACTCCTCGCAGGCACTTGCGAGTCCGTTGTTCCCCGAGGTTGAGAAGCTCTTGTCGTTGTTCAAGGATTCTTGCAAGGAGCTGCTTGAGCTTCGGAAACAGATTGATGGGAGACTCTACAATCTTAAGAAAGATGTCTCAGTTCAAGACTCTAAGCATCGAAAGACACTTTCTGAGCTAGAGAAAGGCGTGGATGGATTGTTTGATAGCTTTGCCAGGTTAGATTCGCGAATTTCAAGTGTTGGGCAGACAGCTGCAAAGATAGGTGATCATCTTCAGAGTGCAGATGCTCAGCGGGAAACAGCCAGTCAAACAATTGAGTTGATAAAATATTTAATGGAGTTCAATAGCAGCCCAGGTGATCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATTGGAAGACATGGAATACCTGTTCCATCGGCTATGGGAAATGCAACTGCTAGCAGAGGCTTAGAAGTTGCAGTTGCTAATTTGCAGGAATACTGCAATGAACTGGAGAATAGATTGCTCTCTCGTTTTGATGCAGCATCACAGAAAAGAGAATTGACCACCATGGCCGAGTGTGCCAAAATTTTGTCTCAGTTTAACAGGGGTACAAGCGCCATGCAACATTATGTGGCAACACGTCCAATGTTCATTGATGTTGAAGTAATGAATGCAGACACTAAGCTGGTTCTAGGTGACCAGGGTGCCCAAGTTAGCCCTAGTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAAGAGGCTGCAACAATCACAGCTGTATTCCCCACACCAAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAATCACTGCCCTTTTGGACAAACTGTTAGAGAAGCCATCTATTGTCAATTTACCTTCCATGGAGGAAGGTGGGCTTCTATTATATCTTCGAATGCTGGCAGTGGCATATGAAAAGACCCGAGAACTAGCAAGAGATCTACAAGCTGTAGGATGTGGTGACTTGGATGTTGAGGGTCTAACAGAGTCCCTATTTTCAAGCCACAAGGACGAATATCCTGAATATGAGCAGGCATCTCTTAGGCAATTATATAAAATGAAGGTGGAAGAATTGCGAGCCGAAAGTCAGCAGATTTCTGATTCATCTGGGTCAATTGGACGCGCAAAAGGAGCTTCAGTAGTTTCTTCTCAACAGCAAATATCTGTTACTGTTGTAACCGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTATTTGCCTCCCAGCCTGCAACACTTGCAAACCATGTAAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACAGCCTGACGGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACCAGTGTTACCCGTAGAGTGGCTGCTGCTGCTGCATCTGCTGCAGAGGCAGCTGCAGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGATATCTGTACAACGATCTGGAAGCAGTGTAGCCATTATTCAACAATATTTTTCTAATTCTATATCTCGGCTTTTGCTCCCTGTTGATGGGGCACATGCTGCTGCTTGTGAGGAAATGGCTACGGCAATGTCAAGCGCAGAGGCAGCTGCTTATAAAGGATTACAACAGTGCATTGAAACTGTCATGGCTGAGGTGGAGCGGTTGCTTTCAGCTGAACAAAAGGCTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGGGCAACCAGTGCCTGCACAAGAGTTGTTGCTTATCTTTCCCGTGTGCTGGAATCTGCATTTACTGCTCTAGAAGGCCTTAACAAACAAGCATTCCTGACTGAGTTGGGGAATCGGTTGCACAAGGTGCTACAAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGGGGGTTGCGACTGAAGCGTGACATTACTGAATATGGAGATTTTCTGCGTAGTTTCAATGCTCCTTCTGTTGATGAAAAGTTTGAATTGCTGGGCATAACGGCCAATGTATTTATTGTTGCTCCTGAGAGCCTTGCAACTTTGTTTGAGGGCACACCCAGCATACGGAAAGACGCTCAAAGATTTATTCAACTTCGGGATGACTACAAGGCAGCCAAACTTGCGTCCAAACTAAGTTCCTTGTGGTCTTAA 2487 0.4604 MREPTDGASKPSKTSSSGTTFPLILDIDDFKGDFSFDALFGNLVGELLPSFKLEEAEADGGEPNGHIRAPSDAAKYSSQALASPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLSELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIPVPSAMGNATASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTKLVLGDQGAQVSPSNVARGLSSLYKEITDTVRKEAATITAVFPTPSEVMSILVQRVLEQRITALLDKLLEKPSIVNLPSMEEGGLLLYLRMLAVAYEKTRELARDLQAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKMKVEELRAESQQISDSSGSIGRAKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPATLANHVKAVFTCLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMISVQRSGSSVAIIQQYFSNSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRATSACTRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLQNHWQKYTFNPSGGLRLKRDITEYGDFLRSFNAPSVDEKFELLGITANVFIVAPESLATLFEGTPSIRKDAQRFIQLRDDYKAAKLASKLSSLWS* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1281 828 Coils Coil 245 265 - -
Pvu10g1281 828 Pfam Exocyst complex component Sec10 140 477 IPR009976 GO:0005737|GO:0006887
Pvu10g1281 828 Pfam Exocyst complex component Sec10 493 822 IPR009976 GO:0005737|GO:0006887
Pvu10g1281 828 PANTHER SEC10 14 827 IPR009976 GO:0005737|GO:0006887
Pvu10g1281 828 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 14 827 - -
Pvu10g1281 828 Gene3D - 661 821 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1281 K19984 - gmx:100820430 1412.9