Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1275 ATGCATATGGACTCCTCCTCCGACGAGGAGGAGGATGACCACCGCAACCTCGTCGACCATAACCACCGCAAACCTCCGTCCCCGCACCTCGCCGCCGCCTTCCACGTCGAAGATCCCTCCTCGCGCTTCTCCCACGTGAATTCCAGATTCCAGAAGAAGTACATTGTCGCAATTCTCGCTATCCTCCTCGTTATCCTCTTCTTCTCCGTCGCCGATTTCCACAGCCTTTCCTCAAGCTCTTCCTTCCAATTCGACTCCATCACCGATCGAATGAAGGAATCAGAATTGCGCGCCATTAACCTCTTGCGTCGACAGCAGCTAGGACTCTTAACCGCGTGGAACACCACGCGCCAGTCCAACGTGTCGGATCCGAACCAATTGGAGGATCTGAAATCCACATTGTTCAAGCAGATTTCTCTCAACCGTGAGATTGAGCAGATTCTATTGAATCCGCATTCCATGGGGAACAGTGTTGAGCCTGAATTCGATTTAAACGCTACTCTGAACGGCGTCATTTACGATAGGTGTAGAACGGTGGATCAGAATTTGTCGGAGAGGAGAACCATCCAGTGGAACCCTAGGGATGGTAAATTTTTACTTGCTATATGCGTTTCGGGGCAAATGTCTAACCATTTGATTTGTTTGGAGAAACACATATTTTTCGCTGCTTTGCTAAATAGGATTTTGGTGATTCCTAGTTCCAAGGTGGATTACCGGTTCGATAGAGTCGTGGACATTGATCGCATTAACAAGTGCTTGGGGAAGAAAGTGGTGGTTTCCTTTGAGGACTTTTCGAATTTGAAGAAGGGTCACATGCACATTGATAAGTTTTTGTGTTACTTTTCGAAGCCTTCGCCTTGTTATTTGGATGATGAATGGTTGAAGAAGTTGGAGGGTTTAGGTTTGACTATGAATAAACCTGAGGTCGTGTGGGATGAGGATACCCGGAATCCGAAGAACAAGACGGTTCAGGATGTGCTGGGGAAGTTTAGCTATGATGATGATGTTATGGCAATTGGGGATGTGTTCTACGCTGAAGTGGAACCAGAATGGGTGATGCAACCTGGTGGGCCAATTGCTCACCAATGCAAGACTCTCATTGAACCTAATCGCCTTATTTCACTCACTGCCCAACGGTTTATTCAGACGTTTCTGGGAAAGAACTTCGTTGCATTGCATTTCCGAAGACACGGGTTTTTGAAATTCTGTAATGCTAAAAAGCCAAGTTGCTTTTTCCCCATACCTCAAGCTGCAGAGTGCATCTTGAGGGTGGTTGAGAGGGCTGATGCACCTATAGTTTATCTTTCTACGGATGCAGCAGAAAGTGAAACTGGTCTTCTTCAGTCACTGGTCGTGCTGAATGGCAGGCCTGTTCCTCTTGTAATACGACCAGCTCGAAATTCAGCAGAAAAATGGGATGCTCTGTTGTACAGGCATGGTTTGGATGGAGATACACAGGTGGAAGCTATGCTGGACAAGACTATATGTGCCATGTCTAGCGTGTTCATTGGAGCCCCTGGTTCCACTTTCACCGAAGACATTCTGCGGCTGAGAAGGGGCTGGGAAACGGCATCGATATGTGATGAGTATCTTTGCCAAGGTGAGGAACCAGACATTGTAGCGGAAAATGAATAA 1635 0.4722 MHMDSSSDEEEDDHRNLVDHNHRKPPSPHLAAAFHVEDPSSRFSHVNSRFQKKYIVAILAILLVILFFSVADFHSLSSSSSFQFDSITDRMKESELRAINLLRRQQLGLLTAWNTTRQSNVSDPNQLEDLKSTLFKQISLNREIEQILLNPHSMGNSVEPEFDLNATLNGVIYDRCRTVDQNLSERRTIQWNPRDGKFLLAICVSGQMSNHLICLEKHIFFAALLNRILVIPSSKVDYRFDRVVDIDRINKCLGKKVVVSFEDFSNLKKGHMHIDKFLCYFSKPSPCYLDDEWLKKLEGLGLTMNKPEVVWDEDTRNPKNKTVQDVLGKFSYDDDVMAIGDVFYAEVEPEWVMQPGGPIAHQCKTLIEPNRLISLTAQRFIQTFLGKNFVALHFRRHGFLKFCNAKKPSCFFPIPQAAECILRVVERADAPIVYLSTDAAESETGLLQSLVVLNGRPVPLVIRPARNSAEKWDALLYRHGLDGDTQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRRGWETASICDEYLCQGEEPDIVAENE* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1275 544 MobiDBLite consensus disorder prediction 1 24 - -
Pvu10g1275 544 PANTHER - 4 544 - -
Pvu10g1275 544 Gene3D - 363 529 - -
Pvu10g1275 544 CDD O-FucT_like 360 519 - -
Pvu10g1275 544 Pfam GDP-fucose protein O-fucosyltransferase 217 519 IPR019378 -
Pvu10g1275 544 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 4 544 IPR045130 GO:0036066|GO:0046922
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1275 Pvu-Chr10 39246413 39249402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1275 K03691 - gmx:100776069 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1275 10 39246413 39249402 Pvu10g1275 10 39246413 39249402 ECH
Pvu9g2695 9 37323053 37325604 Pvu10g1275 10 39246413 39249402 PCT