Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1266 ATGATTTCAAGTAAAGGAAATGTGTTTGGCACCAAGGGGAGAAGGGGTTTGGATTTCATGGTTTTGGTGTTAACAGTGTCGTGGTTTTGTTTGACTGCTATACGTGTCTCAGCTGCAACACAAGCAGACCCCCCATCACCTCAACAGAACCAAAAGCTAAGGTTTGGCCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAAATGGCAAGATCACACCTTGCTTGAATGTGCTCCCTTCTCAGAATTTTTCTTGCTCTGACCTCAATACCACTGCCTTTATTAACAGAATGATCCAAGCTGAGAAGCCCAATCTTATTGTCTTCACTGGAGACAATATCTTTGGCTATGATTCCATGGATTCGGTTAAATCATTGGAAGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTGGGCAACCATGACCAGGAAGGAACCCTCTCTAGGGGAGGGGTGATGAAGCATATTGTTGGGATGAAAAACACCTTATCCAAATTAAATCCTCCAGAAGTACATAGCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCTCTGGTTTTGAAAATAAATCAGTGCTCAACCTATACTTTCTTGATAGTGGAGATTATTCCAAAGTTTCTTCAATTTCTGGTTATGATTGGATCAAGCCCTCCCAGCAACTTTGGTTCCAACAAACATCTGCAAAGCTTAAGAAAGCATATACAAGTGGACCAATGCCCCAGAAAGATGCTGCTCCTGGTCTTACATATTTCCACATCCCTCTGCCAGAATATGCTATTTTTGACTCATCAAACATGATAGGTGTGAAACTGGAACCGGATGGCGATGGCATTAGCTCTGCTTCTGTGAACTCTGGCTTCTTCTCAACCTTGGTTTCAGCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGATCACCTGAATGACTTCTGCGGAAAGATTAAGAATATACAACTTTGTTATGCTGGGGGATTTGGATACCATGCTTATGGAAAGGCGGGGTGGTCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGGAGAAAACGGAGAAAGGAGGTTGGGGAGATGTTAAGTCAATTAAAACATGGAAACGCCTTGATGATCAGCATCTTACTGGAATTGATGGCGAGGTCCTGTGGAGCAAGAGCTCTCCTGGTACCTAA 1209 0.4351 MISSKGNVFGTKGRRGLDFMVLVLTVSWFCLTAIRVSAATQADPPSPQQNQKLRFGQNGEFKILQVADMHYANGKITPCLNVLPSQNFSCSDLNTTAFINRMIQAEKPNLIVFTGDNIFGYDSMDSVKSLEAAFAPAIASNIPWVAVLGNHDQEGTLSRGGVMKHIVGMKNTLSKLNPPEVHSIDGFGNYNLEVGGVEGSGFENKSVLNLYFLDSGDYSKVSSISGYDWIKPSQQLWFQQTSAKLKKAYTSGPMPQKDAAPGLTYFHIPLPEYAIFDSSNMIGVKLEPDGDGISSASVNSGFFSTLVSAGDVKAVFTGHDHLNDFCGKIKNIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGGWGDVKSIKTWKRLDDQHLTGIDGEVLWSKSSPGT* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1266 402 Pfam Calcineurin-like phosphoesterase 61 322 IPR004843 GO:0016787
Pvu10g1266 402 SUPERFAMILY Metallo-dependent phosphatases 58 358 IPR029052 -
Pvu10g1266 402 PIRSF Ptase_At2g46880 12 395 IPR011230 -
Pvu10g1266 402 CDD MPP_Dcr2 59 346 - -
Pvu10g1266 402 PANTHER - 38 399 - -
Pvu10g1266 402 Gene3D - 84 399 IPR029052 -
Pvu10g1266 402 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 38 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1266 Pvu-Chr10 39164556 39168010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1266 - - var:108347461 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1266 10 39164556 39168010 Pvu10g1266 10 39164556 39168010 ECH
Pvu9g2688 9 37277349 37280936 Pvu10g1266 10 39164556 39168010 PCT