Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1264 ATGGGGGGAAAGAGGAGGAAGAACGACGATTCAGACGTGGAAGATTCAGAAACACCGTCCTCCAATAAAAATAAGGCAATAAAGACGGAGAAGAAGGATCAATTGCGTCCTTCGATGATAAAGAACAAGGCAAAGAGATCGGAGTTACACGCGAAGTTGAAGCACCAGAAGAAGCTTGATAAGCGCGCTAAAGCTAAGGCTCGTGACGCTGCTCTCAAGAGAACTCTCGAGCTCGGTGAAGAGCTTCCGGAAAAGAAGGTCCCTCGTACAATTGAGAACACTAGGGAATTGGACGAGACAGTTTGCAAGCCCGACGACGAAGAGAGGGGACCTGCGTTTATATCGGAGTTGCTATCTATTATACCAAATGCTCATTACTTTAATCGAGGAACATATGATCTAAAAAAGATTGTAGAAACCAAGAATAAGGACTTCACTTCTGTTATAGTTGTTCACACTAATCGTAGGGAACCGGATGCTCTTTTAATATTTGGTGTACCTAATGGGCCCACTGCTCATTTCAAGCTGTCGAAGCTTGTTTTGCGCAAGGATATCAAG 558 0.4427 MGGKRRKNDDSDVEDSETPSSNKNKAIKTEKKDQLRPSMIKNKAKRSELHAKLKHQKKLDKRAKAKARDAALKRTLELGEELPEKKVPRTIENTRELDETVCKPDDEERGPAFISELLSIIPNAHYFNRGTYDLKKIVETKNKDFTSVIVVHTNRREPDALLIFGVPNGPTAHFKLSKLVLRKDIK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1264 186 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 108 186 IPR044281 GO:0006364|GO:0042134
Pvu10g1264 186 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 29 108 IPR044281 GO:0006364|GO:0042134
Pvu10g1264 186 MobiDBLite consensus disorder prediction 1 46 - -
Pvu10g1264 186 ProSiteProfiles Brix domain profile. 96 186 IPR007109 GO:0006364|GO:0019843
Pvu10g1264 186 Pfam Brix domain 112 186 IPR007109 GO:0006364|GO:0019843
Pvu10g1264 186 PANTHER RIBOSOME PRODUCTION FACTOR 1 108 186 - -
Pvu10g1264 186 PANTHER RIBOSOME PRODUCTION FACTOR 1 29 108 - -
Pvu10g1264 186 SUPERFAMILY Class II aaRS ABD-related 110 186 - -
Pvu10g1264 186 MobiDBLite consensus disorder prediction 47 62 - -
Pvu10g1264 186 MobiDBLite consensus disorder prediction 1 66 - -
Pvu10g1264 186 Gene3D - 102 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1264 Pvu-Chr10 39154621 39156172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1264 K14846 - gmx:100791194 250.366