Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1263 AATCATGGAACTCCAACTAGTCACAAGCCTGAGCTTGTACTGAATAACTTCACAACACGTCTAGGGTTGATACATTCACTTTTCCCTCAAGATCCAGAATTTAAAGGTCGACGAGTAGTCACCTTCCACAACCAGAGAGATTTTATTTTCTTCCGGCATCACCGGTATATATCTGTTAAACATACAATATTGCCATTGCTTCAAAATATTAGTAATTTTCATTTTCCAGACATTGTGTTACCTTTAACCATACTTAAAGGTACATTTTTGAAACACAAAGAACTTAAAAGAGCTGAGTCGAAAGGTAAAAAGGACAAAGATGACAAGAGCGATGATGTTCCTGAACAGAAAACAATTGCTCGTCTTCAGGAATGTGGCCCTCGTTTCACGTTGAAGTTGATTAGCCTGCATAATGGAACATTTGACACAAAGGGTGGAGAATACGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGAAGGTTTTTCCTATGA 498 0.3916 NHGTPTSHKPELVLNNFTTRLGLIHSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYISVKHTILPLLQNISNFHFPDIVLPLTILKGTFLKHKELKRAESKGKKDKDDKSDDVPEQKTIARLQECGPRFTLKLISLHNGTFDTKGGEYEWVHKPEMDTSRRRFFL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1263 165 MobiDBLite consensus disorder prediction 96 115 - -
Pvu10g1263 165 Pfam Brix domain 4 134 IPR007109 GO:0006364|GO:0019843
Pvu10g1263 165 ProSiteProfiles Brix domain profile. 1 142 IPR007109 GO:0006364|GO:0019843
Pvu10g1263 165 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 1 165 IPR044281 GO:0006364|GO:0042134
Pvu10g1263 165 SUPERFAMILY Class II aaRS ABD-related 1 139 - -
Pvu10g1263 165 PANTHER RIBOSOME PRODUCTION FACTOR 1 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1263 Pvu-Chr10 39149270 39151218 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1263 K14846 - gmx:100785331 222.246