Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1253 ATGGCCACCGCAACCGCCACCACCGCCACCGCCACCGCCACAAAGCCACTCTTAACCGACCTAGCTTCCACCATCGATCGTGTTCCCTCCAACTTCATCAGACCCCTTTCTGACCGTCCAAACCTTCACCAACTTCACTCTTTCTCAGCTTCCATTCCCATCATCGACCTTCATGACTTTGACGGTCCAAATCGCCCCAAAATCATCCAAAACATTGCACATGCTTGCCAACACTATGGCTTCTTTCAAATTGTGAACCATGGAATTCCGGAGGAGTTGGTGAGTAAGATGGTGAACGTGTCGAAGGAGTTCTTTGGGTTGCCGGAGAGTGAGAGGCTGAAGAATTACTCCGACGACCCTTGCAAGACCACAAGGCTTTCCACCAGTTTCAATGTCAAGACTGAGAAAGTTTCCAACTGGAGAGACTTCTTGAGACTTCACTGCCACCCCCTTGAGGATTACATTCTGGAATGGCCTGCAAATCCTCCATCTTTCAGGGAAGATGTTGCGGAGTACAGTAGAAAAATGAGGGGTTTATCAGTGAAGCTGCTTGAGGGAATATCAGAGAGTTTGGGGTTGGAGAGAGATTACATAGAGAAAGCACTGGGGAAACATGGACAGCACATGGCTATGAACTACTACCCTCCATGTCCTGAGCCAGAGTTAACATATGGATTGCCACCACATGCTGATCCAAATGCCATCACTATTCTGCTCCAGAATGATGTGCCTGGCTTGCAAGTCCTCTATGACGGCCACTGGTTATCCGTTAATCCTGTTCCCAACACCTTCATAGTCAACATTGGTGACCAAATTCAGGTGATAAGCAACGACAGGTACAAGAGTGTGTTGCATCGAGCATTGGTGAATTGTGAGAAGGAAAGAATGTCCATTCCAACATTCTACTGTCCTTCACCTGACGCAACCATAAAACCAGCACCTCAACTCGTGGACGATGATCATCCTGTGCAGTACAAAAGCTTCACATACAGAGAATACTATGACAAGTTCTGGAACAGAGGACTTTCAAAAGAAACCTGCGTCGACATGTTCAAGGCTTGA 1062 0.4755 MATATATTATATATKPLLTDLASTIDRVPSNFIRPLSDRPNLHQLHSFSASIPIIDLHDFDGPNRPKIIQNIAHACQHYGFFQIVNHGIPEELVSKMVNVSKEFFGLPESERLKNYSDDPCKTTRLSTSFNVKTEKVSNWRDFLRLHCHPLEDYILEWPANPPSFREDVAEYSRKMRGLSVKLLEGISESLGLERDYIEKALGKHGQHMAMNYYPPCPEPELTYGLPPHADPNAITILLQNDVPGLQVLYDGHWLSVNPVPNTFIVNIGDQIQVISNDRYKSVLHRALVNCEKERMSIPTFYCPSPDATIKPAPQLVDDDHPVQYKSFTYREYYDKFWNRGLSKETCVDMFKA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1253 353 Gene3D - 17 341 IPR027443 -
Pvu10g1253 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 154 IPR026992 -
Pvu10g1253 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 13 346 - -
Pvu10g1253 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 304 IPR005123 -
Pvu10g1253 353 SUPERFAMILY Clavaminate synthase-like 22 341 - -
Pvu10g1253 353 Pfam 2OG-Fe(II) oxygenase superfamily 207 304 IPR044861 -
Pvu10g1253 353 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 13 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1253 Pvu-Chr10 38940395 38942915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1253 52 352 Glycosyltransferase AT5G59530 31.715 2.28e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1253 K24028 - gmx:100787979 635.565