Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1251 ATGGCCTCAACCTCTTCTGCTCTCACTATATCCTCTTCTTCCACACTTTTTGATGGCAAGGCTCCAAGACAGTCACCACCAGCTTCTCCACAATGTCTGAGCCTTCCCCTTCCCCATTTGCACTCTCAAAACCGTTCATGGAAGACCACTGCTTATAATGGCAAGATTGCTCGAAATGTTATGGCAATGGCCACAGGAGAGGCACCAGCTGAAGCTTCCTCTACTGAGGTGCCAGAGATTGTCAAGACTCTTCAAGAAACTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCGCTGGTTCTGGCTGGTGTGGTTGCATTGTGGGGCTCAGTTGGGTTGATCTCAGCAATTGATAGGCTTCCTTTGATTCCTGGGATTCTTGAGATTGTAGGCATTGGCTACACTGGGTGGTTCGTATATAAGAACATAGTTTTCAAGCCAGACAGGGAAGCTTTGGTTCAACAAGTAAAAGACACTTACAATGAAATACTCGGGAGCAACTGA 507 0.4635 MASTSSALTISSSSTLFDGKAPRQSPPASPQCLSLPLPHLHSQNRSWKTTAYNGKIARNVMAMATGEAPAEASSTEVPEIVKTLQETWDKVDDKYAVSSLVLAGVVALWGSVGLISAIDRLPLIPGILEIVGIGYTGWFVYKNIVFKPDREALVQQVKDTYNEILGSN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1251 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 166 IPR025564 -
Pvu10g1251 168 MobiDBLite consensus disorder prediction 16 37 - -
Pvu10g1251 168 PANTHER - 1 167 IPR033344 GO:0009579
Pvu10g1251 168 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1251 Pvu-Chr10 38928453 38930881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1251 - - gmx:100306403 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1251 10 38928453 38930881 Pvu10g1251 10 38928453 38930881 ECH
Pvu9g2669 9 37075538 37077634 Pvu10g1251 10 38928453 38930881 PCT