Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1243 ATGTTGCATCTGCCAGTGCAGTGTTTAGAAGCAATTCAAGAATTTAATGATAATTTTTCATTCCAATGCTTTATACTTCTGATTAACCTTGCAACTTGGTCTTTCAAATCTCACAAACTTCAATCAGTTCTCTCTCCCAAACTGTGTGTGCTTCATTGCCTGGTACCAAAAATGGCAACTTTGACTGCTTCAAGTAACTTGGTCTCTGGAAGTTCTCATGTCCACCATGGACCAACTGCATCATATGAGTCTAAAGCAGTGACAATGGGGCTTAAATCTCTAAAGCAGACCAATACTCATAATGGACTGAGAATTTTGAACCCGGTGGATGAGCTAAGAAACAGGACCCCAGTTAAAATCAACTCAAAAGCTACGAGGAAGGGACTTCAAGGCAAGAATGTCAAGCCTAAAGGTGAAATCATATGTGGCATGAAATTGATTTTTGTTGGAATGGAGGTGGGTCCATGGAGCAAAACTGGTGGGTTAGGAGATGTTCTTGGGGGTCTTCCACCAGCATTAGCAGCTTATGGACATCGAGTTATGACTATCGCGCCACGTTACGACCAATACAAAGATGCCTGGGATACAAGTGTTGTAGTTGAGCTGAAAGTAGGGGACAGAACTGAAAAGGTTCGCTACTTCCATTGCTACAAGAGGGGAGTTGATCGTGTCTTTGTGGATCACCCTTTGTTTCTTTCAAAGGTCTGGGGGAAAACCGGAACCAAACTTTATGGACTAACTACAGGAGATGATTATGAAGACAACCAACTACGTTTTAGTCTATTTTGCCAGGCAGCTTTGGAAGCACCAAGGGTTCTGAATCTCAATTCCAGTAAATATTTCTCTGGACCATATGGTGAAGATGTAATTTTCATCGCCAACGATTGGCACACCGCCCTTCTCCCCTGCTACTTGAAAACTATGTACCAGTCAGTAGGCATCTTTAAGAATGCTCGAGTTGTTTTATGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTCACAGACTATGCACTTCTAAATCTCCCTGACCAATTTAAAAGCTCCTTTGACTTTATTGATGGGCATGTTAAACCAGTGATTGGAAGGAAAATCAATTGGATGAAAGCTGGAATTTTAGAATCATGGTTTGTGATAACTGTTAGTCCAAACTATGCTAAAGAACTATTGTCAGGTCCAGATAAAGGAGTGGAACTGGACAACATCCTTCGCAAAAATGAAGATCGTTTAATTGGAATTGTGAATGGCATGGATGTTCAGGAGTGGAATCCATCCACTGACAAGTATATAGCCGTCAAATACGATGCTTCAACAGTTTTGGAAGCAAAGGCTCTTTTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCAGTGGACAGAAATATTCCTCTCATTGGTTTCATTGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGCAGAAGCCATTCCACAATTTATCGAGGAGAATGTTCAGTTGGTAGCCCTAGGAACAGGAAAAAAACAAATGGAAAAACAGCTTCAGGAACTTGAAATATCATACCCTGACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCCCCTAGCCCACATGATAATTGCTGGTGCTGATTTTATATTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTGCAAGCTATGCGCTATGGATCAGTACCTATTGTTTCCTCAACCGGTGGATTAGTTGATACTGTCGAAGAAGGCTTCACTGGATTTCAGATGGGTTCCTTCAATGTTGAATGTGAAGCTGTGGATGCTGCTGATGTTGATGCTATAGCAAAGACTATCAAAAGGGCCCTTGCACTCTACGGAACTCCAGCTTTCACAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGACGTGCTGCTAAGCTTGGAAGTACCTGGCAGTGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAATGTGGCAACTCCATAA 2019 0.421 MLHLPVQCLEAIQEFNDNFSFQCFILLINLATWSFKSHKLQSVLSPKLCVLHCLVPKMATLTASSNLVSGSSHVHHGPTASYESKAVTMGLKSLKQTNTHNGLRILNPVDELRNRTPVKINSKATRKGLQGKNVKPKGEIICGMKLIFVGMEVGPWSKTGGLGDVLGGLPPALAAYGHRVMTIAPRYDQYKDAWDTSVVVELKVGDRTEKVRYFHCYKRGVDRVFVDHPLFLSKVWGKTGTKLYGLTTGDDYEDNQLRFSLFCQAALEAPRVLNLNSSKYFSGPYGEDVIFIANDWHTALLPCYLKTMYQSVGIFKNARVVLCIHNIAYQGRFAFTDYALLNLPDQFKSSFDFIDGHVKPVIGRKINWMKAGILESWFVITVSPNYAKELLSGPDKGVELDNILRKNEDRLIGIVNGMDVQEWNPSTDKYIAVKYDASTVLEAKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILAEAIPQFIEENVQLVALGTGKKQMEKQLQELEISYPDKARGVAKFNVPLAHMIIAGADFILVPSRFEPCGLIQLQAMRYGSVPIVSSTGGLVDTVEEGFTGFQMGSFNVECEAVDAADVDAIAKTIKRALALYGTPAFTEMIKNCMAQDLSWKGPAKKWEDVLLSLEVPGSEPGIDGEEIAPQAKENVATP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1243 672 Pfam Starch synthase catalytic domain 146 406 IPR013534 -
Pvu10g1243 672 Gene3D Glycogen Phosphorylase B; 146 638 - -
Pvu10g1243 672 Pfam Glycosyl transferases group 1 463 585 IPR001296 GO:0016757
Pvu10g1243 672 MobiDBLite consensus disorder prediction 651 672 - -
Pvu10g1243 672 PANTHER GRANULE-BOUND STARCH SYNTHASE 58 672 - -
Pvu10g1243 672 Gene3D Glycogen Phosphorylase B; 419 629 - -
Pvu10g1243 672 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 141 644 - -
Pvu10g1243 672 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 58 672 - -
Pvu10g1243 672 Hamap Glycogen synthase [glgA]. 144 647 IPR011835 GO:0004373
Pvu10g1243 672 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 144 645 IPR011835 GO:0004373
Pvu10g1243 672 CDD GT5_Glycogen_synthase_DULL1-like 145 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1243 Pvu-Chr10 38810797 38815190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1243 58 672 Glycosyltransferase AT1G32900 70.227 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1243 K13679 - gmx:100037476 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1243 10 38810797 38815190 Pvu10g1243 10 38810797 38815190 ECH