Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1234 ATGATGTTTCAGAAAGCCTTCCCTTCAACTCTAGTCTTTCTTTTCTTCTGTGTTGCAGTGTTCTCGACTCCTCCAGAGGATCCAATCAAGTGTTCTTCAGGGAACACAACCTGCACCATCACAAACTCCTACGGCATGTTTCCCGATCGAAGCATCTGTCATGCCTCTAAGGTGCTGTACCCCACCACTGAGCAAGAGCTTGTGTCTATGGTTGCATCAGCAGCTAGAAGCAAAAGCAAGATGAAAGTTGCCACCCGTTTTTCGCACAGCATCCCCAAGCTGGTGTGCCCAGAAGGGCAGAATGGGGTGCTGATAAGCACAAAATACCTGAACAAGATAGTGAAGGTTGATGTGGAAGCAAGGACAATGACTGTGGAGAGTGGCGTGACAATGAAGGATCTTATCAGTGAGGCTGCAAAAGCAGGGTTGGCCTTGCCATATGCACCATATTGGTGGGGTTTGACCATTGGGGGGCTCATGGGAAGTGGTGCTCATGGAAGCACTTTGTGGGGGAAAGGAAGTTCTGTTCATGATTATGTGGTGAACCTTAGGATTGTTAGGCCTGCTTCTCCTCAAGAAGGTTATGCTAAGGTTGAGAGCCTCAATGAACAACATGAAGATCTCAATGCAGCCAAAGTCTCACTTGGGGTGCTTGGAGTTATTTCACAGATTACTCTAAAACTAGAAGGTAGCTTCAAGCGATCCATCACGTATGTGGCAAAAAATGATTCAGATTTGGGAGAAGAAGTTGGTGATTTTGGATATGAACATGAGTTTGGTGATATAACTTGGTACCCAAGTCAACAGAGGGCTGTGTACCGTGTTGATGATCGTGTTCCAATTAATGCATCGGGCAATGGTCTTTACGACTTTATCCCTTTCCGTCCCACTTCTTCTCTTGCATTAGCACTCCTAAGAACCACAGAAGATATTCAAGAATCTGCTGGTGATGCCGACGGGAAGTGCATAAATGCTAAGACCACAACGAATACCCTCATCACATCAGCATATGGACTTACAAACAATGGTATAATCTTCACTGGATACCCTGTGATTGGGTTTCAGAACCGGCTTCAGGCATCTGGGACATGCTTGGATAGTCTTAAAGATGGAAAGATCACAGCATGTGCCTGGGATTCCAGGGTGAAGGGAGAGTTTTTCCACCAAACCACATTCAGCATTGGTTTGTCAGTAGTAAAAGATTTCATTGAAGATGTGCAAAAGCTGGTTCGATTGGAGCCAAAGGGGTTGTGTGGCATAGAGCTTTACAATGGAATTCTGATGCGTTATGTGAAGGCTTCAAAGGCCTATTTGGGGAAGCAAGAGGATGCTTTAGACATTGATATCACATACTACCGTAGCAAGGACCCTATGACTCCTAGGCTCTATGAAGACATTCTTGAAGAGATTGAGCAACTTGGGATTTTCAAATATGGAGGGATACCTCATTGGGGTAAGAATAGGAACTTGGCGTTTGAAGGAGCCATAAAGAAGTACAAAAATGCAGAGAAATTTTTGAAGGTTAAAGAGAAGTATGACTCAGAAGGGCTTTTCTCAAGTACGTGGACAGACCAAATTCTTGGGCTAAAAGATGGGTTGATAATAGTGAAGGATGGATGTGCTTTAGAAGGGTTGTGCATTTGCTCACAGGATAGTCATTGCAATCCAAGCAAAGGTTACTATTGCAGACCAGGCAAAGTTTACAAGGAAGCAAGGGTTTGCACTCATTTAAGATCCAAATGA 1743 0.4435 MMFQKAFPSTLVFLFFCVAVFSTPPEDPIKCSSGNTTCTITNSYGMFPDRSICHASKVLYPTTEQELVSMVASAARSKSKMKVATRFSHSIPKLVCPEGQNGVLISTKYLNKIVKVDVEARTMTVESGVTMKDLISEAAKAGLALPYAPYWWGLTIGGLMGSGAHGSTLWGKGSSVHDYVVNLRIVRPASPQEGYAKVESLNEQHEDLNAAKVSLGVLGVISQITLKLEGSFKRSITYVAKNDSDLGEEVGDFGYEHEFGDITWYPSQQRAVYRVDDRVPINASGNGLYDFIPFRPTSSLALALLRTTEDIQESAGDADGKCINAKTTTNTLITSAYGLTNNGIIFTGYPVIGFQNRLQASGTCLDSLKDGKITACAWDSRVKGEFFHQTTFSIGLSVVKDFIEDVQKLVRLEPKGLCGIELYNGILMRYVKASKAYLGKQEDALDIDITYYRSKDPMTPRLYEDILEEIEQLGIFKYGGIPHWGKNRNLAFEGAIKKYKNAEKFLKVKEKYDSEGLFSSTWTDQILGLKDGLIIVKDGCALEGLCICSQDSHCNPSKGYYCRPGKVYKEARVCTHLRSK* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1234 580 PANTHER GULONOLACTONE OXIDASE 6 577 - -
Pvu10g1234 580 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 228 IPR036318 GO:0050660
Pvu10g1234 580 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 6 577 - -
Pvu10g1234 580 Pfam FAD binding domain 57 188 IPR006094 GO:0050660
Pvu10g1234 580 Gene3D - 389 489 - -
Pvu10g1234 580 ProSiteProfiles PCMH-type FAD-binding domain profile. 51 231 IPR016166 GO:0071949
Pvu10g1234 580 Pfam D-arabinono-1,4-lactone oxidase 388 525 IPR007173 GO:0003885|GO:0016020
Pvu10g1234 580 Gene3D - 112 229 IPR016169 -
Pvu10g1234 580 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 24 575 IPR010030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1234 Pvu-Chr10 38642720 38648213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1234 K00103 - gmx:100790483 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1234 10 38642720 38648213 Pvu10g1234 10 38642720 38648213 ECH
Pvu9g2658 9 37017883 37021905 Pvu10g1234 10 38642720 38648213 PCT