Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1199 ATGGCGGAATCAGATACGTCAATCCGAAACACGAAGATGAACCCTATCGATCACCTTCCCCTCTGTCTCCTCAGATCCGACACGGTCCCACCCGCCCCTACCTTCTCCGAATCCACCGTCGATTTCCTCCCTCACTTCTCCGGCTACTCTTGGATCGCCTACGCCGCTTCTTCTCTCCTCGTTATCTCCCACTTCCCTTCTCCTCTTTCCCCTCATCAATCCCGCATCGGCCCCATTTTCCGCCAATCCTTTCAGCTCTCACCTGATCCCCTCGCTGCCGTCGCCTGGTCCCCTCGCTCACCCTCCTCCGGTGACCTTGCCGCCGCTGCCGATAACTGCATCTGCCTTTTCCACCACGACTCCACCACCGTAAAAGGTTCTTTTTGTTGGAGCCAGAATGCAGTGCTTGTACAACATACGAAAGTTGCAAACATCAAATGGACTGGATCAGGAGATGGAATAATTTCTGTTGGAATGGAGGTGGTTTTCTGGAAAAAGAGCAACAAATGTTGGGAAGTTGCTTGGAAGTTTAAAGCAGATCAACCCCAAACTCTTGTTTCTGCAACGTGGTCTATTGAGGGCCCTTCAGCAACTGCAGCACATCCTAGTAAAGAACAGATTGAAGGGGCCTTGACCAATGAGGAAAGCAAATGTATAGTTGTATGTCAAAGCAATGGACTTTCTGAATATTCAAAAGTCGAACTACATCATCCCCTACCTGTTGTAATGATTCAATGGAGACCACCAAGAGGGAAGTTATCAAACAGATACGGTAAGTGTTCAGTAAGGCATGTTTTGTTGACATGCAGCTTAGATGGGACTGCAAGGTTATGGAGTGAAACTAATAATGGAAAGGGCAGGAGAGTTGGGAAGGACATCAATGATCAGAAAAATGCGGGATGCTCCTTTTCTGTTGTTGCTGTTATTGAGATTAATCAGACCTTAAATGGAACTCTTGGTTCAGATATATTTGTGAGATGGGGGACAGAATTTGAGGGAATATTTAGAATTGGTGAAGAGTCCAAACAAGTTTTTTCCAAAGATGGATTTGAGCATGATGTCAGAAATTGTGATTGGATAGTTGGGTTTGGTCCTGGAATGTTACTTAGCTTTTGGGCTGTCCACTGTCTTGACGATGTCTCACCACTGAGATTCCCTCGAGTTACATTATGGAAGAGACACGAACTCCAGAACCATGACATTGCAAATGTATACAAGTTTAACTCATCTGATTTTAAAAATGCATTATTTCTTCAAAAGGTTATTTTAATGAGAAATTGCCTTTCTGGTCCACCTATTATATGCTCTCCACTTCAGCTATTGTCTTGTAATTCCTTAGTTTGGTCAAATTTCCGTATTCTAACAATACATGATGCTGTAGAGAACTCCATTGATAATGGTAACACAGATAGCATGTCCCCCTATTTGACTGGTGGGGTTTTGAACTTAGATGGTCATAGTGGGAAAATCTTAAAGGTTTCAATTCATCCTTATTCATGCAAAGTTCAATTTGCTGCTTCTCTGGATTCTAATGGACTGCTTCTTTTCTGGTCACTTACTAATATTTCAAACTGCATTTTGGGATGTCCAACTTTGGTTCCTACTATGGAACTCTGTGGAAAGCTTGCCACTCAAGACTCATGCTCATTGTACACAAGCTTGACATGGGCACCTTCAATAGTTGGTGACAAACTGTTTTTTTTCATGGGACATACCCGGGGGATTGATTGCTTCATTGTCAATATTTGTCGAACTGATGAGGAAAACATAGAATGTCACTACTTATGCACTATTCCTTTCAATGGTCATGGTCCTTATGAAGATGGCCCTATTGATATCTTCACAATTCCTCTGAACTCCGCCTGCGACAAAACTTGTTGTAACAGTAAACTTATGCTGTTGGCAGTATGGATGGGGAGATTTCAGGCCCTATCGTGGGAAGTTAACTTGCATTCATTTGACATGTCAACAAACTGTTCTGAATGCAATTTTGATGCTAAAAGCATTGATGACTGTAGTGTTTGGGCATTTGAAAGTACATTTGCTGATAAAAAATATTGCATTACTGTAAATCCATGTTCATGTGAGTTTCCAAGTTCCAATGATCTGGTTACTAGTTTCGCTGTGGCTAATCCAGGCACTCTAAGCCATATACGACAAGAGTTTGGCTTTGCAAATGATCTTTGTAGCAGTTATCCTACATACATCATGGTCACAGGCTCCTCTAACGGCATCTTGAAACTCTGGAAAAGTAAACCTGGGAACTCATTGACCCAACACTTGCCATGGGAGCTTGTGGGTGTTTTTGTTGCACATGATGGTCCCATCAAGGGTATATGTTTCTCTGATTGTGGTGAGAAGATTGCTACGATCGGCCACGAAAGCAATTCCAATGCTATCAATACCATACATATATGGGATGCTGTACCATTAATCAACGCAGGGACTTTTATTTTGGAGGATAAAATAAAGACCAATAGTGATGTTATTGCTCTAAAGTGGTTAACTTTAGGAACAGGGGAGTTATTGCTTGGAGTTTGTTTGCAAAATGAATTACAAATATATGCTCCCAAGCGTTGTATTGGTACAACTTTGTCAAACTCTGAACATTTTCCAAAAATGAATATATGGGTTCGCATTGCATATGCTCACACTTCCATTCCAATTTATGATTTCTTATGGGGACCTAGAGCTGCAGCAGTGGTGATTCATAGAAATTACTTTAGTATATTTAGTCATTGGTTGTTCCACATGGATAAAAGGCAAGGGAGTAATTGTCATCCTTGTGATTCAAAGCCTAACGCTTATAATTGTGAGGATGAAATATATGAAGACATACTTTCTACAGTTTTTACTGAATATGACATTGGTGCTCTCAGAGAACAGACAGATGGAGACAGTCAAGTAGATTTTAATTATGTGCAGTCCATAAAAAAAATCAATATAAAGGACAATTCCAGTAGCTTGTTTCTGGCCAAGGAACAATTAAAATTTGAACTTCTAACCAAGGTTGGTTTATGGAGCATCTTAGAAGTATCTGAGATAATCAGTGGATCGTTGCCTACTTATCACCCTGATGTACTACTTACTAATATCAGTTCAGGAAACTGGAAACGTGCTTATGTAGCTGTGAGGCATCTTGTTGAATGCCTGACTTCTACTTATGATCCTAAAAAGAGACACATCTCCAAAAGAATTGGTCTTCCAAATATTGTATTGTCAAATTATCTAGAAGGCTGTATATCAAAAGTTTCCCAGGGTAAGGGATTTCAGTGGGGTGGGGATTCAGCATCAATTTCACAGGCTCAGAGTAGCTTGTTCCAGTTTCCATATCATTCAGGTTCTAATGCTGAAAATGAAAGCATTTTCTCAACAAAATCTGAGCTTAATGGCTTTATTGGATCACTTGAGAAATTTCCTGATTTACCACTTTTGATTGACATAGAGAAGACACAGATTCTTGCAATTATTGATCTGCTAAGTGAAGTTAGTAGTGCACACTCATCTTCTGCGTATCAGAGTCTTGATGAACCTGGGCGAAGGTTTTGGGTTGCACTACGGTTTCGACAACTGCATTTTCTCCGTAAGTTTGGTAGAGCTGCGTCTTTTGAAGAGTTGCCTGTTAACTCAAGATTGTTTGTATGGGCTTATCACTCTGACAGCCTAGATAATTTATTTGGTTCTGTCATGCCCAATGAACCATCTTGGCAAGAAATGCATGCTTTGGGTTTGGGCTTTTGGTATGCTAATATACCTCAATTACGTGCAAGGATGGAGAAATTGGCAAGAGCTCAGTATTTGAAGAACAAAAATCCAAAGGATTGTGCTTTGCTTTATATTGCATTGAATAGAATTCAAGTTTTGGCTGGCCTTTTCAAAATCAGTAAGGATGAGAAGGATAAACCTCTGGTGGGCTTTCTTTCTCGCAATTTTCAGGATGAAAAAAATAAAGCTGCTGCTTTAAAAAATGCTTATGTATTACTGGGAAGGCATCAGATGGAATTAGCAGTTGCTTTCTTTTTGCTTGGAGGTGATCATTCTTCTGCTATAAACGTTTGTGCTAAGAATCTTGGAGATGAGCAGCTTGCCTTAGTCATTTGTCGTCTTGTTGATGGCCATGGGGGATCTTTGGAGCATCACCTAATTACAAAGTACATACTTCCATCTGCAATTGATAAAGGAGACTACTGGCTTGCAAGCCTTCTGGAGTGGGAAATGGGTAATTACTACAGATCTTTTTATAGAATGCTAGAGTATTCAGTAAACCCTGGGCCTCCGGAGTCGACTGTCATGTCCAATTGTGGTTCTTTTCTGGACCCTACAGTTGGTTTTTATTGCCAAATGCTAGCAACTAAGAATAGCATGCGGAACGCTGTGGGGGAGCACAATTCTGCAATTCTTTTAAGATGGGCAACTTTGATGACAGTTGCTTCCTTAAAAAGATGTGGTAATCCTCTTGAAGCATTGGAGTATTTCTCATCTTCACTGAGCATGCCTGGGACCGCAGATCAAGACAGTGAATTAGGTGATAATCATGATGTGCTGTCCAATACTCTTAAGCCTTTGCCTAGAGAAGGCTCTAATTGGTTGTCTGCTAATGTTTCCATGCATCTCGAGTTCCATATTAAATTGAATTTGGCACTTTGCTACTTATCAAAATTGATAAGAGAGCATCCAAGCTGGCTTGACACTTTTTCAGAATACAATGAAGAAGCTTCTGATTCTGACGAGTACATGATGTACTATGAGAAATCAGTTGAAAGTTTTAAACAAAAGTTATACAGTGGGCTTGCTCTATTTGAACAGAGATTTTTATTGGCTCCCCACTGTCTAATCGGCATGATTTTACTCTTACTTTGCCATCATGGATCATTGTACATTGGATATGATATGACAGATGGATCTACCCAAGGAGAACTGTCTCAAAAGAAGAGCGATATGTTTGATGATTTCAATTTATGTTACTCTAGGATTACACCCCTCTTTAAGACTGTAGAAGAAGTCTCCTTTCTCTATTCAAGATTATTTTGTGCCTGCAGTATGGAAAATTCTCAACGAGATTCATTTATTGATAGCAAACCTAAGTTTTTTTATGCTTCAGAGTGCCGCATTGAAGGTGTTTTTATTTCACTGTGGTTTTTAAGAGCAACTTTGAGGATCCAGTTGAGTTCTACTAGCAAAGATCTTATTAAAACACTTCTTGATATCCTAGATTTTTATGAGTACTATTTACATTTTTCATTAGCTTGGCTTCAGAAAAACTCTGAAGTGCTTTTGTATATGGTGGAACCATTCTTTGTTGCACAATCTAATGGCCATAATCCTTATGACATTGATATGGTGAATCTAAAGAAGCTTATCCCAAAAGTTGGACAGTTGTTGTCTCAAACTTCTTCCATACCTAGTGTGCAAAACCTTCAACTGTCTGAACGTGATATGAAGCATTCAATTCCTGATGATGAAAGATGGAAGATTTTAGGGACCTGCTTGTGGCAGCATATGTCTAGATTCATGATATCAAATTTGAATTCGGTTCTTGCCAAACTTGAAGATGGTAATTTGTCTGGTCCTTTCCATAGAAAGTATGCTTATGGCGAGTCTTGTATCATAAGTATGGATTCTGAAAGCATTAGCTTGCCAGAGAAGATTCGGATAGTCTCATATAGCCTATGTGATCTACTGATGACGACAGTTACTCACATCTCTTCTTATCTTGTTAAACAACATGTAGAATTTCTGTGGCAGAAAGTAAAGAATGATTTGAATGTACAGACTCTTGAATGGTTAAAACATAAATCTGAATTCAGTCAGAACCAAAACCTGGACGTTTTGGAACCGGGGAACAGGAAAGATTATTCAGTTCATCAGTTATTATGGGATCACAGTGCAGATCCCAAATTGATATTGGATTGCTTTGCACAGGAAAAAATCAATTGGCCAAATGATTTGGATCATATGCACACTAAGGGGTGGAATGACTTGTCAATGAGTATGACAGGGCTGCATAAAACTGATGATACATGTGGTGACGACTTCAATCTTAGCAATAGATCTTCTAATCATGAAGTTGGAACTCCTGTTAAAGAAACATCTCTGAATGGCCATCATTCTGCAAGATCAAACCAGAAAGATATAACTTCTACAAATTTTGCAGTTTTCCAGAGTCCAAGAGAAATGTACAAGAGAAATGGGGAACTTTTGGAGGCATTGTGTATAAACTCTACTTGTCAACAGGAAGCTGCCGTTGCTAGCAACAGGAAGGGTATAATGTTCTTTCATCTGGAAGATGAGATTCCACACAGTGGTAAATCAAATGGTCTTTTGTGGGCCACAGCTGATTGGCCTCAGAATGGGTGGGCAGGTTCAGAATCCACCCCTACTCCAACATGTGTTTCTCCCGGTGTTGGGCTTGGGAGCAAGAAAGGGGCACACCTTGGGCTGGGTGGAGCAACTGTCGGTGTGGACTCTTCAACTTGGCCCAGCAATGACTTGACAGGTGGCGGAGTATTAGGAATGCTAGGTTATGCTGATATTGGTGCCTCTAGATTAGGTTGGGAAATTCAACAAGATTTTGAAGATTTTGTTGATCCACCTGCCACTTTGGATAACATAAGTACCAGGGCTTTGTCTAGTCATCCAATGAGGCCTTTCTTCTTGGTTGGTTCTAGCAATACACACATTTACTTGTGGGAGTTCAACAAAGACAAAGCTACTGCTACATATGGAGTGCTGCCTGCTGCGAATGTCCCTCCACCTTATGCCCTTGCATCAATTTCAGCCTTACAGTTTGACCACTTTGGACACCGGTTTGCCAGTGCTGCATTAGATGGAACTGTCTGCACATGGCAGCTGGAGGTTGGAGGAAGGAGCAATGTCCGTCCAATAGAATCATCTCTTTGCTTTAATGGTCACGCTTCGGATGTCACATATTTTTCCTCAAGTGGATCAATAATAGCTGTGGCTGGATATAGCTCTAATGGTGTTAATGTGGTCATATGGGATACTTTAGCTCCACCCACAACTTCTCGCGCTTCCATTTTATGTCATGAAGGTGGTGCACAAACCGTGTCTGTTTCTGATAATCATGTGGGAAGTGGTTCTGTATCCCCCCTTATTGTGACTGGTGGTAAAGGTGGTGATGTTGGACTTCATGACTTCCGTTATATAGCTACTGGAAAGGCTAAAAGGCATAGGCATACTGATAACATTGGACAAAGCTCTGCCAAATCTTTGGCTCGTGACAAGGACCAGAATGTAGATGGGATGCTTTGGTACATTCCAAAGGCTCACTCAGGGAGTGTCACAAAAGTAGTTACCATCCCCAATACCAGCTTGTTTTTAACTGGAAGCACAGATGGAGATGTCAAACTCTGGGATGCCCAGAGCACAAAGTTAGTACATCACTGGTCAAAGATACATGAAAAACACACTTTTCTACAGCCAAGTTCTCGTGGATTTGGTGGTGTAGTGCGGGCTGCTGTAACAGATATAAAAGTTGTTTCCAATGGTTTTCTTACATGCGGTGGGGATGGAACTGTAAAGCTGGTACGGCTTGACAATCACCTGCGTGCGTGGCCATTGAATTAA 7587 0.4079 MAESDTSIRNTKMNPIDHLPLCLLRSDTVPPAPTFSESTVDFLPHFSGYSWIAYAASSLLVISHFPSPLSPHQSRIGPIFRQSFQLSPDPLAAVAWSPRSPSSGDLAAAADNCICLFHHDSTTVKGSFCWSQNAVLVQHTKVANIKWTGSGDGIISVGMEVVFWKKSNKCWEVAWKFKADQPQTLVSATWSIEGPSATAAHPSKEQIEGALTNEESKCIVVCQSNGLSEYSKVELHHPLPVVMIQWRPPRGKLSNRYGKCSVRHVLLTCSLDGTARLWSETNNGKGRRVGKDINDQKNAGCSFSVVAVIEINQTLNGTLGSDIFVRWGTEFEGIFRIGEESKQVFSKDGFEHDVRNCDWIVGFGPGMLLSFWAVHCLDDVSPLRFPRVTLWKRHELQNHDIANVYKFNSSDFKNALFLQKVILMRNCLSGPPIICSPLQLLSCNSLVWSNFRILTIHDAVENSIDNGNTDSMSPYLTGGVLNLDGHSGKILKVSIHPYSCKVQFAASLDSNGLLLFWSLTNISNCILGCPTLVPTMELCGKLATQDSCSLYTSLTWAPSIVGDKLFFFMGHTRGIDCFIVNICRTDEENIECHYLCTIPFNGHGPYEDGPIDIFTIPLNSACDKTCCNSKLMLLAVWMGRFQALSWEVNLHSFDMSTNCSECNFDAKSIDDCSVWAFESTFADKKYCITVNPCSCEFPSSNDLVTSFAVANPGTLSHIRQEFGFANDLCSSYPTYIMVTGSSNGILKLWKSKPGNSLTQHLPWELVGVFVAHDGPIKGICFSDCGEKIATIGHESNSNAINTIHIWDAVPLINAGTFILEDKIKTNSDVIALKWLTLGTGELLLGVCLQNELQIYAPKRCIGTTLSNSEHFPKMNIWVRIAYAHTSIPIYDFLWGPRAAAVVIHRNYFSIFSHWLFHMDKRQGSNCHPCDSKPNAYNCEDEIYEDILSTVFTEYDIGALREQTDGDSQVDFNYVQSIKKINIKDNSSSLFLAKEQLKFELLTKVGLWSILEVSEIISGSLPTYHPDVLLTNISSGNWKRAYVAVRHLVECLTSTYDPKKRHISKRIGLPNIVLSNYLEGCISKVSQGKGFQWGGDSASISQAQSSLFQFPYHSGSNAENESIFSTKSELNGFIGSLEKFPDLPLLIDIEKTQILAIIDLLSEVSSAHSSSAYQSLDEPGRRFWVALRFRQLHFLRKFGRAASFEELPVNSRLFVWAYHSDSLDNLFGSVMPNEPSWQEMHALGLGFWYANIPQLRARMEKLARAQYLKNKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQDEKNKAAALKNAYVLLGRHQMELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVDGHGGSLEHHLITKYILPSAIDKGDYWLASLLEWEMGNYYRSFYRMLEYSVNPGPPESTVMSNCGSFLDPTVGFYCQMLATKNSMRNAVGEHNSAILLRWATLMTVASLKRCGNPLEALEYFSSSLSMPGTADQDSELGDNHDVLSNTLKPLPREGSNWLSANVSMHLEFHIKLNLALCYLSKLIREHPSWLDTFSEYNEEASDSDEYMMYYEKSVESFKQKLYSGLALFEQRFLLAPHCLIGMILLLLCHHGSLYIGYDMTDGSTQGELSQKKSDMFDDFNLCYSRITPLFKTVEEVSFLYSRLFCACSMENSQRDSFIDSKPKFFYASECRIEGVFISLWFLRATLRIQLSSTSKDLIKTLLDILDFYEYYLHFSLAWLQKNSEVLLYMVEPFFVAQSNGHNPYDIDMVNLKKLIPKVGQLLSQTSSIPSVQNLQLSERDMKHSIPDDERWKILGTCLWQHMSRFMISNLNSVLAKLEDGNLSGPFHRKYAYGESCIISMDSESISLPEKIRIVSYSLCDLLMTTVTHISSYLVKQHVEFLWQKVKNDLNVQTLEWLKHKSEFSQNQNLDVLEPGNRKDYSVHQLLWDHSADPKLILDCFAQEKINWPNDLDHMHTKGWNDLSMSMTGLHKTDDTCGDDFNLSNRSSNHEVGTPVKETSLNGHHSARSNQKDITSTNFAVFQSPREMYKRNGELLEALCINSTCQQEAAVASNRKGIMFFHLEDEIPHSGKSNGLLWATADWPQNGWAGSESTPTPTCVSPGVGLGSKKGAHLGLGGATVGVDSSTWPSNDLTGGGVLGMLGYADIGASRLGWEIQQDFEDFVDPPATLDNISTRALSSHPMRPFFLVGSSNTHIYLWEFNKDKATATYGVLPAANVPPPYALASISALQFDHFGHRFASAALDGTVCTWQLEVGGRSNVRPIESSLCFNGHASDVTYFSSSGSIIAVAGYSSNGVNVVIWDTLAPPTTSRASILCHEGGAQTVSVSDNHVGSGSVSPLIVTGGKGGDVGLHDFRYIATGKAKRHRHTDNIGQSSAKSLARDKDQNVDGMLWYIPKAHSGSVTKVVTIPNTSLFLTGSTDGDVKLWDAQSTKLVHHWSKIHEKHTFLQPSSRGFGGVVRAAVTDIKVVSNGFLTCGGDGTVKLVRLDNHLRAWPLN* 2529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1199 2528 Gene3D - 447 872 IPR015943 GO:0005515
Pvu10g1199 2528 Gene3D - 2203 2412 IPR015943 GO:0005515
Pvu10g1199 2528 PANTHER RABCONNECTIN-RELATED 25 2518 - -
Pvu10g1199 2528 Gene3D - 2413 2527 IPR015943 GO:0005515
Pvu10g1199 2528 MobiDBLite consensus disorder prediction 2016 2041 - -
Pvu10g1199 2528 SUPERFAMILY WD40 repeat-like 2207 2520 IPR036322 GO:0005515
Pvu10g1199 2528 SMART WD40_4 476 518 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2420 2459 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2248 2283 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 690 750 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2471 2517 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 762 807 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 228 279 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2294 2334 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2194 2231 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 2339 2385 IPR001680 GO:0005515
Pvu10g1199 2528 SMART WD40_4 77 118 IPR001680 GO:0005515
Pvu10g1199 2528 PANTHER RABCONNECTIN-3A 25 2518 - -
Pvu10g1199 2528 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 2427 2462 - -
Pvu10g1199 2528 Pfam RAVE protein 1 C terminal 800 1408 IPR022033 -
Pvu10g1199 2528 ProSiteProfiles Trp-Asp (WD) repeats profile. 2427 2468 IPR001680 GO:0005515
Pvu10g1199 2528 Gene3D - 68 316 IPR015943 GO:0005515
Pvu10g1199 2528 Pfam WD domain, G-beta repeat 2427 2459 IPR001680 GO:0005515
Pvu10g1199 2528 SUPERFAMILY WD40 repeat-like 83 811 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1199 K24155 - gmx:100789935 4498.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1199 10 38111871 38129202 Pvu10g1199 10 38111871 38129202 ECH