Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1193 AGCTCTGGAAAATCTTCAGTGTTAGAGAGTGTTGTCGGAAAGGACTTTCTACCACGTGGATCTGGAATTGTTACTCGGCGTCCTCTTGTTTTGCAACTTCATAAGATTGACGAAGGGAGAGAATACGCTGAATTTATGCACCTTCCAAGGAAGAAATTTGCTGATTTTGCTGCTGTTAGGCAGGAGATCGCTGACGAGACCGATAGAGAAACAGGACGCAATAAGGGTATTTCATCTGTCCCCATCCATCTGAGTATCTACTCCCCTCACGTTGTGAATCTGACACTGGTTGATCTTCCGGGACTAACAAAAGTCGCTGTTGATGGTCAGCATGAGGGCATTGTGCAAGACATTGAAAATATGGTTCGGGGTTTTATTGAAAAGCCGAATTGCATCATTTTGGCAATATCTCCTGCTAATCAAGACCTTGCAACCTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCTAAAGGGGAAAGGACATTCGGAGTGTTGACAAAGATTGATCTGATGGACAAGGGTACTGATGCGAGTGAGATCCTCGAAGGGAAATCATATAAGCTAAACTTCCCGTGGATTGGTGTTGTAAACCGCTCCCAAGCTGATATCAATAAACAAGTTGATATGATTGCTGCTCGGAAAAGAGAAAACGAGTATTTTGCTAATACCCCAGAATACAGACATCTTGCTTCCAGAATGGGCTCTGTACATCTAGGAAAGGTTCTATCCAAGCATTTGGAAACTGTCATCAAGTCTCGGATCCCAGGCCTCCAATCACTCATTAACAAGACTATCATTGAATTGGAGACAGAATTGAACCGTATTGGCAAACCTATTGCTGCTGATACTGGAGGGAAGTTGTACACGATAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATACGGCCTGGTGGAGAGAAAATTTACCAAGTATTTGATAATCAATTTCCAGCATCTTTAAAACGGCTGCAGTTTGACAAACATTTATCAATGGACAATGTGCGGAAACTAATAACTGAAGCAGATGGTTATCAACCTCATCTCATAGCTCCTGAGCAAGGATACCGACGCCTTATCGAATCTTGCTTGGTATCAATTAGGGGGCCTGCTGAAGCAGCTGTTGATGCGGTTCACGGAATTTTGAAGGATTTGATTCAGAAATCTATGAGTGAGACAATGGAATTAAAGCAGTATCCCACCTTGAAGGTAGAACTCGGAAGTGCAGCTGTTGATTCGTTGGAGAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCTTTTAGTGGACATGGAGTATGGCTATTTGACTGTTGAATTTTTCCGCAAACTTCCCCAAGACGCAGAAAAGGGTGGAAATCCAACCCATTCACTTTTCGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACGGTCCTGTCCTATGTGAACATGGTATGTGGGACCCTGAGAAATACCATTCCAAAGTCCGTAGTTTATTGTCAAGTGCGTGAGGCTAAGCGGAGCTTACTGGATCATTTCTTCACAGAATTGGGGAAAAAGGAGGGAAAACAACTAGCTGCACTTCTAAATGAGGACCCAGCAATCATGCAGCGGCGTACCTCCCTGGCAAGGAGGCTAGAGCTATACAGAAGTGCACAAACAGAGATTGAGGCAGTTGCATGGGAGAGGTAG 1701 0.4333 SSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGREYAEFMHLPRKKFADFAAVRQEIADETDRETGRNKGISSVPIHLSIYSPHVVNLTLVDLPGLTKVAVDGQHEGIVQDIENMVRGFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDASEILEGKSYKLNFPWIGVVNRSQADINKQVDMIAARKRENEYFANTPEYRHLASRMGSVHLGKVLSKHLETVIKSRIPGLQSLINKTIIELETELNRIGKPIAADTGGKLYTIMEICRTFDQIFKDHLDGIRPGGEKIYQVFDNQFPASLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAVHGILKDLIQKSMSETMELKQYPTLKVELGSAAVDSLERMREESKKATLLLVDMEYGYLTVEFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGTLRNTIPKSVVYCQVREAKRSLLDHFFTELGKKEGKQLAALLNEDPAIMQRRTSLARRLELYRSAQTEIEAVAWER* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1193 566 Pfam Dynamin GTPase effector domain 470 562 IPR003130 GO:0003924|GO:0005525
Pvu10g1193 566 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 17 26 IPR019762 -
Pvu10g1193 566 SMART dynamin_3 1 207 IPR001401 GO:0003924|GO:0005525
Pvu10g1193 566 Pfam Dynamin central region 177 444 IPR000375 -
Pvu10g1193 566 Gene3D Dynamin, middle domain 288 542 - -
Pvu10g1193 566 Gene3D - 1 265 IPR027417 -
Pvu10g1193 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 264 IPR027417 -
Pvu10g1193 566 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 256 IPR030381 GO:0005525
Pvu10g1193 566 SMART GED_2 469 562 IPR003130 GO:0003924|GO:0005525
Pvu10g1193 566 PANTHER DYNAMIN 1 565 IPR022812 -
Pvu10g1193 566 ProSiteProfiles GED domain profile. 474 566 IPR020850 -
Pvu10g1193 566 PRINTS Dynamin signature 16 33 IPR022812 -
Pvu10g1193 566 PRINTS Dynamin signature 88 105 IPR022812 -
Pvu10g1193 566 PRINTS Dynamin signature 138 156 IPR022812 -
Pvu10g1193 566 PRINTS Dynamin signature 157 173 IPR022812 -
Pvu10g1193 566 PRINTS Dynamin signature 180 199 IPR022812 -
Pvu10g1193 566 CDD DLP_1 1 256 IPR001401 GO:0003924|GO:0005525
Pvu10g1193 566 PANTHER DYNAMIN-RELATED PROTEIN 1B 1 565 - -
Pvu10g1193 566 Pfam Dynamin family 1 169 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1193 Pvu-Chr10 37981033 37990230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1193 - - gmx:100793097 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1193 10 37981033 37990230 Pvu10g1193 10 37981033 37990230 ECH