Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1191 ATGGCAAATAGTAGATCTTGGACACTGATATGGCCATCTTTTGTCAGGCTGTGTGTTCTGAATCTTGTAGTGAATTTCAAAATCACAGCATTGGCTGATGACAGTGGAAATGGTGGTGTTGCAACAGAAGACACCTGCAAGAACACAAATTATCAAACTTTCCTCCCTCCACCGTACCAGAATATATCCCACTTGATATGCACACCTGTATGGCATACCTTTGAATTGAGGTACATCCAGAATGGTGATACCACAACTGTCATACTATCTGCTCCCTACACTATAGGGTGGGTTGGAATTGGATTTTCTAGAGATGGTATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAGTAAACATGGTCATGCAAAAATCAACCAATTTTACCTACGGGGAAAGAGGACATCAGAAGTCATAATAGACAAAGGGGAACTTCCCCTAAATAATGTCCCTGCGGCTGTGGCAACTAATGGGGCTGAAATTCATTTGGCATTTCAGTTGCAGACGACAACCCCATTTCAGAAACAGCCAATTTTGTTGGCTTTTGGCAGTAAATATCCACAGAACCACCACCTCTCCACCCATGAAGACAAAACAGCAATTGTATTTGATTTCTCTGCAGGTTCTACGAGTCCTGTATCCCAAGAATTGACTCAGATGAGGACGAACCATGGAATTTTGGGCATAATAGGGTGGGGTCTAATCCTGCCTTTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCGTGTGGCTCTATCTCCATGCAGTCTTTCAGTTTGTGGGATTCACATTTGGGCTTAGTACAGTCATTCTTGGATTACAACTCTATTCCAAAATGCATGCCCATATTCAAGTTCACAGAGGGATAGGCATCTTTGTCCTGGTACTAAGTATTCTTCAGATATTTGCATTGATCTTGAGACCAAACAAGGATTCCAAGATCCGAAAAATTTGGAATTGGTACCACGGTTGGTTTGGAAGGATTACACTCATATTTGCAACCATCAACATAGTGTTGGGGATACAAGCTGCTGGGGCAGGAAGTGATTGGAAGATAGGCTATGGATTCCTTTTTGGTATTATGGTTGCTGCAGCTACTGTTCTTGAAGTATTGGCTTATTTGAAAAGATTAGAGATGCGTTCTCTGCCTCCTAACTTCCATACAGACCCTGTTGGAGGAGCTACATTTCCAAGGGGAATGTGA 1215 0.4263 MANSRSWTLIWPSFVRLCVLNLVVNFKITALADDSGNGGVATEDTCKNTNYQTFLPPPYQNISHLICTPVWHTFELRYIQNGDTTTVILSAPYTIGWVGIGFSRDGMMVGSSAMVGWISKHGHAKINQFYLRGKRTSEVIIDKGELPLNNVPAAVATNGAEIHLAFQLQTTTPFQKQPILLAFGSKYPQNHHLSTHEDKTAIVFDFSAGSTSPVSQELTQMRTNHGILGIIGWGLILPLGAIIARYFRHKDPVWLYLHAVFQFVGFTFGLSTVILGLQLYSKMHAHIQVHRGIGIFVLVLSILQIFALILRPNKDSKIRKIWNWYHGWFGRITLIFATINIVLGIQAAGAGSDWKIGYGFLFGIMVAAATVLEVLAYLKRLEMRSLPPNFHTDPVGGATFPRGM* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1191 404 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 16 391 - -
Pvu10g1191 404 Pfam DOMON domain 76 143 - -
Pvu10g1191 404 SMART 561_7 224 345 IPR006593 -
Pvu10g1191 404 CDD DOMON_DOH 73 201 IPR045266 -
Pvu10g1191 404 SMART DOMON_3 97 184 IPR005018 -
Pvu10g1191 404 Pfam Eukaryotic cytochrome b561 225 346 IPR006593 -
Pvu10g1191 404 CDD Cyt_b561_FRRS1_like 204 374 - -
Pvu10g1191 404 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Pvu10g1191 404 Gene3D - 199 383 - -
Pvu10g1191 404 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Pvu10g1191 404 PANTHER MEMBRANE PROTEIN-LIKE 16 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1191 Pvu-Chr10 37965998 37968900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1191 - - pvu:PHAVU_010G114200g 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1191 10 37965998 37968900 Pvu10g1191 10 37965998 37968900 ECH
Pvu6g1186 6 22874806 22877637 Pvu10g1191 10 37965998 37968900 PCT