Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1189 ATGTCTATCCTCACTCGTGTTACCCGCCAAAATTCCTCCACCGCCACCTTCCTCACGCGCCACCTCTCCTCCGCCGCTTCCAAACTCCACGCTTCGTACACTTTCAAACCACCGTCGTCTCTCACTCCCGAGCCACAATGCGCCAATTCCCCTCCCATCAAGCCCAACCAAAGAAAACCCAAGCCCAAGTACCGGCCTCCTTCCTCTCTCGACCCGGCCGGCTACAAGCGGGTTCGTTCCAATGACCTGCCCTTCGATTTCCGGTTCAGCTACACGGAGAGCAGCGCGAAGGTGCGGCCCATTGGGCTCAGGGAGCCCAAGTACTCGCCCTTTGGGCCGGGCCGGCTCGACCGGAAGTGGACTGGTGTGTGTGCGCCAGCGGTGGACCCCACGGTGGAGAGTTTGGAGGCTGCGGAGGATCCTAAGTTGGAGGAGAAGAGGAAGATGAAGAGAGAGATGATTCAAGGAAAACCCCTTACCAGTGACGAGAGAAAGGCATTGGTATCGCAATTTGAGAGAAGCAAAACTAATAGGCATGTCAATCTCGGAAGGGATGGTTTAACTCACAACATGTTGAATGTTATTCAAAATCATTGGAAGTTTGCTGAAGCAGTTAGAATCAAATGCATGGGTGTTCCAACTATGGACATGAAAAATATTTGCACCCAGCTTGAGGACAAAACATTTGGGAAGGTCATCTTCAGACATGGAGGTACACTTATATTATACAGAGGCAGGAATTATAATCCTAAAAAGAGATCTATTGTTCCTACGATGTTGTGGAAGCCCCATGAACCTGTATATCCCAGACTGATTAAGAAAACAATCGATGGCTTAAGTATTAATGAAACAAAAGAAATGCGGAAGAGGGGACTAGCTCTTCCTGCTTTAACTAAGCTTGCAAAAAATGGTTATTATGCTTTTTTGGTACCGATGGTCAGAGATGCTTTCCTCTCCTGTGAATTGGTTCGGATAGACTGTGAGGGGCTTGAAAGGAAAGATTACAAGAAAATAGGCTGCAAACTCAGGGACATGGTCCCCTGTATTCCGGTGACGTTTGAGAATGAACAGGTTGTGGTTTGGAGGGGGAAGGATTATAAGCCTCCAAAGGATGGATACTTTCTTAAAGATAGAGAATCATTTGACGACGACAATGGTGATTTGAATGTGGGAGAAGAGCAACAGGCTATGTAA 1194 0.4799 MSILTRVTRQNSSTATFLTRHLSSAASKLHASYTFKPPSSLTPEPQCANSPPIKPNQRKPKPKYRPPSSLDPAGYKRVRSNDLPFDFRFSYTESSAKVRPIGLREPKYSPFGPGRLDRKWTGVCAPAVDPTVESLEAAEDPKLEEKRKMKREMIQGKPLTSDERKALVSQFERSKTNRHVNLGRDGLTHNMLNVIQNHWKFAEAVRIKCMGVPTMDMKNICTQLEDKTFGKVIFRHGGTLILYRGRNYNPKKRSIVPTMLWKPHEPVYPRLIKKTIDGLSINETKEMRKRGLALPALTKLAKNGYYAFLVPMVRDAFLSCELVRIDCEGLERKDYKKIGCKLRDMVPCIPVTFENEQVVVWRGKDYKPPKDGYFLKDRESFDDDNGDLNVGEEQQAM* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1189 397 Pfam CRS1 / YhbY (CRM) domain 282 362 IPR001890 GO:0003723
Pvu10g1189 397 Pfam CRS1 / YhbY (CRM) domain 159 244 IPR001890 GO:0003723
Pvu10g1189 397 SMART CRS1_YhbY_2 279 362 IPR001890 GO:0003723
Pvu10g1189 397 SMART CRS1_YhbY_2 159 244 IPR001890 GO:0003723
Pvu10g1189 397 Gene3D - 279 373 IPR035920 -
Pvu10g1189 397 SUPERFAMILY YhbY-like 158 253 IPR035920 -
Pvu10g1189 397 MobiDBLite consensus disorder prediction 377 397 - -
Pvu10g1189 397 Gene3D - 158 255 IPR035920 -
Pvu10g1189 397 ProSiteProfiles CRM domain profile. 157 255 IPR001890 GO:0003723
Pvu10g1189 397 PANTHER CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL 5 394 - -
Pvu10g1189 397 ProSiteProfiles CRM domain profile. 277 373 IPR001890 GO:0003723
Pvu10g1189 397 MobiDBLite consensus disorder prediction 36 77 - -
Pvu10g1189 397 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 5 394 IPR044599 GO:0000373
Pvu10g1189 397 SUPERFAMILY YhbY-like 279 369 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1189 Pvu-Chr10 37922325 37926533 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1189 - - gmx:100789954 702.975