Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1185 ATGTTGACGATGATCATTGTTGCGCTCATCACGGCCATTCTTTTTGGATTCTGCATTGCTCCAGTCAACGGCAGACGCCGGAGGAACAGAGCCGTCGGGTTCTTCCATCCGTACACTAACGACGGCGGCGGCGGGGAGAGGGTGCTCTGGTGCGCCGTCAGAGGCATCCAAGAGGAAATCCCTGATCTTGACTGCTATATCTACACTGGAGATCATGACGCCACCCCTCAATCGCTGATGGCTCGAGCCCTCGATCGCTTTGGGGTCACGCTCCTCTCTCCTCCAAAGGTGGTTCATTTGTACAAGAGAAAGTGGATCGAAGAAACCACTTATCCGCACTTTACAATGATTGGTCAAAGTCTGGGTTCTATGTATCTTGCTTGGGAGGCTTTGTGCAAGCTTACTCCTTTATATTACTTTGACACAAGTGGATATGCTTTTACATATCCATTAGCCCGGTTGTTTGGATGTAAAGTTATTTGCTATACACATTATCCTACTATCAGTTCAGACATGCTATCTCGTGTTCGTGAGCGCAGTTTGATGTATAATAATGATGCCTTAATTACAAAAAGTGTTTGGCTTTCAAGATGCAAGATTGTCTATTATACATTCTTCAGCTGCCTGTATGGGATTGCAGGATCATGTGCACACCTGGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAATCTTTGGAAAGTTCCAGATCGTATTAAGCGAGTTTATCCTCCTTGTGATACTTCTGGACTCCAGGTACTTCCCTTGGAACGATCAACAGAAATTCCTGTAATAATATCTGTTGCACAATTTCGACCGGAGAAGGCACACACTCTCCAACTAGAGGCTTTTTCAGCTGCCATTAAGAAATTAGATCCTACCTTGCCAAAACCTAAGTTACAAATTGTGGGTAGCTGTAGAAATAAGTCAGATGATGACAGACTTCAAATGTTAAAAAAGAAAGCAATTGAGCTGAATATTAGTGAACAAGTGGAATTTCACAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGCATTCATTCAATGACTGATGAGCATTTTGGCATTAGTGTTGTAGAATACATGGCTGCCGGTGCTATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTGCTAGATGAAGATGGACAGCAAACAGGATTTCTTGCCTGCACTGTTGAAGAATATGCAGACGCCCTGGTGAAGACAGTAACTATGCCTGAGATGGAGAGACTTAAGATGGCTGCAGCTGCAAGGAGAAGGGCAAAGAGATTTTCTGAGCAAAGGTTTTATGATGACTTCAAAGCTGCAGTGCGTCCTATTTTATGTCATGTTTCTAGGTGA 1380 0.4377 MLTMIIVALITAILFGFCIAPVNGRRRRNRAVGFFHPYTNDGGGGERVLWCAVRGIQEEIPDLDCYIYTGDHDATPQSLMARALDRFGVTLLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSMYLAWEALCKLTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLSRVRERSLMYNNDALITKSVWLSRCKIVYYTFFSCLYGIAGSCAHLAMVNSSWTKSHIENLWKVPDRIKRVYPPCDTSGLQVLPLERSTEIPVIISVAQFRPEKAHTLQLEAFSAAIKKLDPTLPKPKLQIVGSCRNKSDDDRLQMLKKKAIELNISEQVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADALVKTVTMPEMERLKMAAAARRRAKRFSEQRFYDDFKAAVRPILCHVSR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1185 459 CDD GT4_ALG11-like 30 445 IPR038013 GO:0004377
Pvu10g1185 459 Pfam ALG11 mannosyltransferase N-terminus 30 235 IPR031814 -
Pvu10g1185 459 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 20 454 IPR038013 GO:0004377
Pvu10g1185 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 33 450 - -
Pvu10g1185 459 Gene3D Glycogen Phosphorylase B; 253 437 - -
Pvu10g1185 459 Pfam Glycosyl transferases group 1 263 431 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1185 Pvu-Chr10 37887552 37893551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1185 217 442 Glycosyltransferase AT1G78800 28.511 3.17e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1185 K03844 - gmx:100808662 842.802