Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1179 ATGAAGAACTTGCAGAGCTCAGAAGAATTACAGTCATCAACTCAAGCTTATCATGAGCCCAAGAGTGAACAACCAAACAATCATACAACTGATGCTCCTGTCACAGACACAGGCTCAGCTTCTGCTACAAGTAATGACAGTAAAAAAGTTTCACGGCAGGATATTGAGTTTGTCCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAAGTGGTTAAAACACTTCTGACTCGGGCAAAGATAGATCCTGGATTCACTACCCTTGTATGGCAGAAGTTGGAGGAAGAGAACGCTGATTTCTTCAGGGCCTACTATATCAGGCTAAAATTGAAAAAGCAAATTCTTTTATTCAATCATTTGCTTGAGCATCAGTATCATCTCATGAAGTGTCCCATGCCTGCGAAGGTTCCATTGGCTCCAATACAGAACGGAATCCATCCAATGCCTGTCAACAACCTACCTATGGGATACCCAGTGCTACAACAGCCTCCCATGCAAGCAACAGGTCAACCTCATCATCTTGATTCCATGGGTTGTGGTTTATCAAGTTGTCATGTAGTTAATGGAGTCCCTGCCCCAGGCAACTTTCACCCCATTCGAATGAACTCTGGGAATGATATGGTGATGGACCACAACGCTCCTGATATGGCTCCTGTTATTCAACCAAATGGTACAATGTCATCCGTCTCAGAAATGCCAGTAAGTCCGACATCAGTTGCATCGAGTGGCCATTTCCCCTTCACTGCATCAGAAATATCAGGAATGGGTGCAGATGCATCAGCTCTTGATACAGCATTTACATCTGATGTGGCAAGTTCAGTAGGATTACAGCTTGCGCCAGATGGTGGCAATGGAATTTCCAGATCACTGGATCAAATTCAATGGAATTTTAGTCTATCAGATCTAACGGCAGATTTACCAAACTTGGGAGATCTAGGAGCTCTGGGAAACTATCCTGGTTCACCATTTTTGCCATCCGATTCAGATATTTTGCTCGAATCACCTGATCAACAGGATATAGTTGACGACTTCTTTGTTAATTCTGAGCCCCCATGCTCTCAATCAGATGAGGATAAATCTTGA 1095 0.4274 MKNLQSSEELQSSTQAYHEPKSEQPNNHTTDAPVTDTGSASATSNDSKKVSRQDIEFVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKCPMPAKVPLAPIQNGIHPMPVNNLPMGYPVLQQPPMQATGQPHHLDSMGCGLSSCHVVNGVPAPGNFHPIRMNSGNDMVMDHNAPDMAPVIQPNGTMSSVSEMPVSPTSVASSGHFPFTASEISGMGADASALDTAFTSDVASSVGLQLAPDGGNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDILLESPDQQDIVDDFFVNSEPPCSQSDEDKS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1179 364 MobiDBLite consensus disorder prediction 1 48 - -
Pvu10g1179 364 MobiDBLite consensus disorder prediction 1 49 - -
Pvu10g1179 364 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 364 - -
Pvu10g1179 364 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Pvu10g1179 364 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 111 IPR006476 -
Pvu10g1179 364 PANTHER OS02G0137100 PROTEIN 1 364 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1179 Pvu-Chr10 37769070 37775721 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1179 - - pvu:PHAVU_010G113000g 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1179 10 37769070 37775721 Pvu10g1179 10 37769070 37775721 ECH