Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1169 ATGGCGAGAGTGAAGACCACGCCAGCTTCGCGCAAAACCGGTAAAAAAAAAGCCGCACGCGCTTCCACGTCCACGCCACGGTCACAGCAATCGCCTGGGAGGAGAAGGGCTCAACAAGAGGAGCCGCAGGAAGAAGAAGAAGAAGAAGCAGCAGCAGCGCCCGAGACTCAGGGAAGGAAGAAAAGGCGCAATAAGGCAGGAACAGTGGCGCTTCGCGAGATTCGTCAATTTCAGAGGAGTTCCAAACTTCTTATCCCGGCTGCCCCTTTTATGAGATGTGTCAGACAAATTACACAGCAATTCTCTACGGAGGTGAGTCGCTGGACACCTGAAGCAGTGGTAGCACTCCAGGAGGCAGCTGAGGAATGTCTAGTTCACTTGTTTGAAGATGGAATGCTTTGTGCAATTCACGCAAGGCGTGTTACTCTTATGACAAAGGATATTCAGTTGGCTCGGAGACTTGGAGGAATAGGAAGGCCTTGGTGA 486 0.5185 MARVKTTPASRKTGKKKAARASTSTPRSQQSPGRRRAQQEEPQEEEEEEAAAAPETQGRKKRRNKAGTVALREIRQFQRSSKLLIPAAPFMRCVRQITQQFSTEVSRWTPEAVVALQEAAEECLVHLFEDGMLCAIHARRVTLMTKDIQLARRLGGIGRPW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1169 161 MobiDBLite consensus disorder prediction 1 67 - -
Pvu10g1169 161 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 10 161 - -
Pvu10g1169 161 SUPERFAMILY Histone-fold 39 157 IPR009072 GO:0046982
Pvu10g1169 161 Gene3D Histone, subunit A 2 157 IPR009072 GO:0046982
Pvu10g1169 161 SMART h35 56 159 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 PANTHER HISTONE H3 10 161 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 PRINTS Histone H3 signature 14 28 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 PRINTS Histone H3 signature 103 121 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 PRINTS Histone H3 signature 121 137 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 PRINTS Histone H3 signature 137 158 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu10g1169 161 MobiDBLite consensus disorder prediction 19 36 - -
Pvu10g1169 161 Pfam Core histone H2A/H2B/H3/H4 34 154 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1169 Pvu-Chr10 37617013 37621872 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1169 K11253 - gmx:100811872 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1169 10 37617013 37621872 Pvu10g1169 10 37617013 37621872 ECH