Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1165 ATGGAGGACTCGGTGAGGAGGTGCCCCAAGTGCCAAATTGTTCTTCCCGAGCTCGCCAATTACACTGTTTATCAATGTGTTAGTTGTGGTACTGTTCTTCGAGGAAAGCTTAAAAGTTCTGAAGGTGGGAGGTTGTGGGAAACGTCAGATGAGGGAGAAGGTGGAGGAGATCATGGTAGATCAGAAAGTTTCTGGGGTAAAGGGGTAGTTGATTTGAGTGATAATTCAGATGTTGAGATTAGGTCCAATGGTGGTTTCTCAAGGGAGGGTCAAAGAAGGGATTTGGGGAAACCAAATAAAGGACATGAGAAGTTTTTGGATGGTTCCAAGGATGGAGATGAGAAAGGAGTTTTGGAGAATGACTTTGTGAGTAAGGACAAACGGGGTAAATCAATTGGAAGAGAGCAGCAGGAGCAGAAGTCTCACATGGGAGGGGACCAGTTCTACGGGAGAGTTTCTAATTGGCCTTATGGGGAGAGAGGTGAGATGGAGGGGTTTCGGAGAAAGTCTCAAGCAGATATGGAGAGTGTCAGATTTCCCACTCATAGTTATCCTGATGAGGGATCTTCAAATAGCTATTCCAGTTTTTCTTACAATTATGGGGAACAGTGGAGGAATTTCAAGGACATGGATGGTGCGAGTAAGGTTCAGCATCTTGAGCAAGATAGAGCCGAAATTCTAAGGAAGCTGGATGAGTTAACCAACCAATTGAACAAGTCTTCTGAGGTGGTTAGTAACCCCAAAGAAAAGGTTCTTACCGATGGAAAAATGGTTCCTCCAGATCCTTATAGTGGCCCTGAAACTTGGTTTCCCGATGGATATGGATCATCAGCTATGAACAGGACCTCAAGACAATTCTTTGGCCCTAATAAACACATGTCAGGTCCCCCTTATTTCAATTATCATCATAATCCATATGCTTATGCAGCAGCTCCTGAAATGGCTATGCGCAACTTTCACCCTTCCATGCATAATCCAAATTATGCTCCTGGATATGGGGATCCTTTTGTATCCTCAATGATGAGAAATTCACATCCTTTACCCCACCAATTCCCACAAAAACCAATGCATCCCTACTTTCCTCCACGCTATGCTGATACTCGTCCAGATTCATATGATTTATATGCTCGCAATGCTTTTCATCATCACCCACCTTCTTGCTCTTGTTTACGTTGCTACAACAATAAAAGAATAGAATCAGTGTCACCTGCTGCATTTGTTAATAGCAGATCTCCTCATACCCCTTCCCCAAATGATCCTATGTTGTACGGTCCTGAGATCCCAGGAGTTGGTCCTTATGTTCATAACTCTAGAGCTGCCATTCCTGCCATGGGTTTACATGAAAGACAACTACATTCACGATGGCCTAGAGACTACAATTCTGAGATGGGTGGGTTTGTTGGAAGCCGTCCTCGAAAAGTAGTGTCTGTGAGTAGTACTCGGCAATGCCTTCCTATAGCTGGTGGTTCTCCTTTCATCACATGTCATAACTGCTTTGAGTTACTACAACTGCCTAAAAAGACACTGGTCATGGTTAAAAATCGTAAGCAGAAAATGCGATGTGGAGCTTGTTCTTCAGAAATAAAAGTTGCTGTCATCAATAAGAAGCTAGTAATTTCTCCTCATTCTGAAATGGAGGAAACTACCACATCCACAAGGGTTGATGATGCCACTGGTGAGGTTGTGAATAGTCGTGTGTTCCATTCCCGTGGTGATGTGAACACGAGTGCTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCAGTTGATAGAGAATCTTCTGTGCGGGCTGAAGACTCAACCTTAAAGTCGCGAGAGATGCAAAGTTTCCATTCTTCATCTCCCAGTATTTCTGATGATGAAAATAGTCCAGAAATTATGACTGCACCAGGTGAAGCTACTAAGTCCATTCATCAGTCATCTAAAGCCTCTCTATCTTCTTCACCTGGTGGTTCATTTAATGACCACGCTGTAAATCGATTAGGGAAAGGAAACCAAAGTAGTCGCTCAGATCAAGAGGTGGAAAAAATAGAAAAAAATGCCTCGAGGCAAAATTCTCTGAAAGAGTTAGTGCTTGCAACTGAGATGGATGTCATTGATTATTCTAACACTGCGGTCTCCCAGGAGTCTGGTGATGCAAGCAGAGAACATGATCCTCCTAGGTCCAACAAAAGGGGTGATTCACTTTTAGCAAACATTATTAAGAAAGATAATGGGAAAAGTAATGTTACTGTAAATGGACAGCCAATACCAGATCGAGTGATTAAAAAGGCTGAAAAGCTTGCTGGACCAGTCCAGCCAGGAAATTACTGGTATGATTCTCAGGCTGGATTTTGGGGTGTCATGGGTGGACCATGTCTTGGGATAATTCTGCCATTCATAGAAGAGTTCCAGCATCCCATGCCAGAAAAATGTGCTGATGGAAATACTGGTGTTTTTGTAAATGGTAGGGAACTTAACCAAAAAGATTTAGAGTTGCTTTCTCGTAGAGGACTCCCTCGTGATAGCAATAGGTCTTACGTGGTTGAAATTTCTGGGAGGGTTTGGGATGAAGACACAGGAGAAGAGCTGGACAGCCTTGGTAAACTTGCACCAACAGTGGAGAAAGAAAGGCGTGGATTTGGCATGAAAGTACCAAGATCAGCTGCATAA 2664 0.4313 MEDSVRRCPKCQIVLPELANYTVYQCVSCGTVLRGKLKSSEGGRLWETSDEGEGGGDHGRSESFWGKGVVDLSDNSDVEIRSNGGFSREGQRRDLGKPNKGHEKFLDGSKDGDEKGVLENDFVSKDKRGKSIGREQQEQKSHMGGDQFYGRVSNWPYGERGEMEGFRRKSQADMESVRFPTHSYPDEGSSNSYSSFSYNYGEQWRNFKDMDGASKVQHLEQDRAEILRKLDELTNQLNKSSEVVSNPKEKVLTDGKMVPPDPYSGPETWFPDGYGSSAMNRTSRQFFGPNKHMSGPPYFNYHHNPYAYAAAPEMAMRNFHPSMHNPNYAPGYGDPFVSSMMRNSHPLPHQFPQKPMHPYFPPRYADTRPDSYDLYARNAFHHHPPSCSCLRCYNNKRIESVSPAAFVNSRSPHTPSPNDPMLYGPEIPGVGPYVHNSRAAIPAMGLHERQLHSRWPRDYNSEMGGFVGSRPRKVVSVSSTRQCLPIAGGSPFITCHNCFELLQLPKKTLVMVKNRKQKMRCGACSSEIKVAVINKKLVISPHSEMEETTTSTRVDDATGEVVNSRVFHSRGDVNTSAVNFSSDDYSGYDFHSVDRESSVRAEDSTLKSREMQSFHSSSPSISDDENSPEIMTAPGEATKSIHQSSKASLSSSPGGSFNDHAVNRLGKGNQSSRSDQEVEKIEKNASRQNSLKELVLATEMDVIDYSNTAVSQESGDASREHDPPRSNKRGDSLLANIIKKDNGKSNVTVNGQPIPDRVIKKAEKLAGPVQPGNYWYDSQAGFWGVMGGPCLGIILPFIEEFQHPMPEKCADGNTGVFVNGRELNQKDLELLSRRGLPRDSNRSYVVEISGRVWDEDTGEELDSLGKLAPTVEKERRGFGMKVPRSAA* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1165 887 MobiDBLite consensus disorder prediction 709 731 - -
Pvu10g1165 887 PANTHER EXTRA-LARGE G-LIKE PROTEIN 5 885 - -
Pvu10g1165 887 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 5 885 IPR040244 GO:1900150
Pvu10g1165 887 Pfam Probable zinc-ribbon domain 487 531 IPR021480 -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 594 609 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 86 141 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 43 60 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 610 627 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 594 686 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 43 151 - -
Pvu10g1165 887 Coils Coil 216 243 - -
Pvu10g1165 887 MobiDBLite consensus disorder prediction 637 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1165 Pvu-Chr10 37550288 37554985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1165 - - gmx:100798240 1376.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1165 10 37550288 37554985 Pvu10g1165 10 37550288 37554985 ECH
Pvu6g1165 6 22700793 22706380 Pvu10g1165 10 37550288 37554985 PCT