Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1161 ATGACTACTGCAAATGGTGGGACTGAGACTGAGGAGCACAAGAGAAAAACTAATGATCCTTTTCTTAAGCATGAGGGTCAGCAAAACATGTCAAAATCACCTAGATTGTGCACACCTATTAAGAAGGAATGGTCAGAGAATTTGCCAAATGAGAATGTGATTGGTAATCAAGATAATCATACGAATAGGAATTATAAGAGCAAGAATACAGACTTAGTTAGTCACCCACATAATTCAAGACAGGAAAGGAATCAATTGACTATTGAGTCCAAGTATTATGGCTTAAATAGAGAAGTTGTTTCCAAGGTTGAAGAACAGTTCAGGTTAAGTAAAGAACTTAAGGGAAATGATTCTGAAATTTGGGGTCTGAAGTCTCTCTCTGACAAGAGTGTAAATCAGAACTCACTGAAAGTCTCAGGGGATATAAGCCATATGGGCAAGGCTATAATCTCAAATAATGCACATCTTATTAGCAGCATAACTCAGAGTACTTCATCTGCTTATCATTATCCTCAATCTGTAAAGCAAACAAGGAAGGGAAAGGGGGTTATTTGTGAAGATTTAGACAAAAGCTTCATCATTGTAGGAGCACATAAGAGCCAGGAGGATGAGAAGCCTTTTGCGGCCAAGTTTCAATCTGATACACTGAGGAGATCAAATGTTGAAGATGATAATAAGCCTTTAGTGGAAGGAACTGTAGTGTCTGGTATCAATGAAATCAACTTAAGAGAGTGGCTGAAATGTGAATGTCATAAAGTGAAGAAATTAAAAAAGATTCATATATTTAAGCAGGTATTGGAAACGGTTGATTTTGCACACTCCCAAGGACTTGTCTTGCTAGACTTTCAACCATCTTGTTTCACTTTATTGCCTTCAAGTAAGATTAAGTACATTGGTTCATATGGCCAACAACAGTTAGGTAATGAAGTCATGACCTGCAATGTGAATAGGAAAAGGCCTCTCGAACAGAATACCTGTGCTTGCCAAAGTTCGAGTACAAAGCAGAAAAAACTATTTGAGGAGACAGAATCTTTTAGGCAGTCGCATCAATGCTCCTTTACTCATGACTGCAGGACAATAGTGAATCAAACTTCTGACACAATCAGACCCTTGGAATCGAGGAGTAAAGAAAGTATTTGCCAAAATATTTCTAATTGTCAGCAAACTTTTACCAAAGAAAATCAGTTTATGTCTGCTTCCATTCAGTTAGAAGAGAAGTCGTATTGTAGTCCAGAAATGCTGAATGATGGAGTCTGCACCTTGTCATCTAATATTTACAGCCTTGGAGTTCTTCTTTTTGAATTGCTGTGCAATATTGAGTCAGAGGAGGCGCATTCAACTGTGATGTTGGAGTTGTGTCATAGAATCTTACCGCCTAAATTTCTAGCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCTTCTGCATCCTGAACCATCCTCTCGCCCTAATGCTAGGATAATTTTAGAATCTGAGTTTATACGCCCATCAGAGGAATCAAGTTCTATAGATGATGATGGAATATCTGATGACGAGGCTGAAACAGAAAAATTACTACATTTTCTAACTTCAATCAAAAAAGAAAAGATAAAACAGGCAGCCAAGTTGGAAGAACAGCTACATTTGTTGAATGAAGATATTCAGGAGGTAGAAAGAAGTTATTCATTTGGGACAGATTCAGTATTTCCATTGGCACAAATGAAAAATTCTGAAGTGAGAGAGAACAATTTACATTTTCAAGATTCTTCTGGTTCAGACATCAGTAGATCCATTCAAAGGTCATTTGGTGATGAAGAAAGATTTATGGCTAACATAAGTCAGCTAGAGAATTCTTACTTTTCTACGAGAATCCAAGCCCTGCTAAAAGATTCACCTATTTCAAGCAATTATAAAAATCTGATGGAAAATAGATGGAGATTGCCTCAAGGAGAGCATGCTAATAAGGAGCCTAGAAGAATTCATAATTCTGTTGGTTGTCTAGGATCCTTCTTTGAAGGTTTATGCAAGTTCGCTCGTTACAGCAAGTTTGAAGAGCGTGGCAGATTAAGAAATAGAGATCTGCTTAGTTCATCCAATGTAATGTGTGCTTTAAGTTTTGACCGTGATGAGGACTACATGGCAGCAGGAGGAGTTTCAAAGAAAATCAAGATTTTTGACCTCAATGCTATTTCAAGCGATTCTGTTGACATCCAATACCCAGTGGTTGAGATGACAAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACACCAGCATAAAAAATCATCTGGCATCTACTGACTATGATGGTGTGGTTCAGATGTGGGATGCAGAGTCTGGTCAGCCATTGTCCCAATACACGGAGCACCAAAAGAGAGCTTGGTCTGTTCATTTTTCTCTGGCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTGTGGAATATCAGCGAGAAAAATTCTCTGGGAACCATCAGGAACGCTGCCAATATATGCTGTGTTCAGTTCTCTTCTTACTCAACAAATCTTTTATTTTTTGGATCAGCTGATTTCAAGGTTTATGGTTATGATCTTCGTCACACTAGGATTCCATGGTGCACATTAACTGGTCATGGCAAAGCTGTTAGTTATGTAAAATTTATAGATGCTGAAGCAGTTGTCTCTTCTTCCACTGACAACTCTTTGAAGCTTTGGGACCTTAAAAAAACCAGCTCTACTGGTTTGTCATCTGATGCATGTGCCTTAACCTATAAAGGTCATAGTAATGAAAAGAATTTTGCTGGATTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTGTACTGTTATCACAAATCTCTGCCAGTGCCAATTGCTGCTCACAAATTTGAGTCAATTGATCCTATTTCTGGTCATCTAAGTAGTGGTGATAATAATGGACACTTTGTTTCTAGTGTTTGCTGGAGAAAGAAATCTAACATGCTTGTTGCCGCCAACTCAGTTGGAATTGTGAAACTGTTGCAGATGGTCTGA 3021 0.383 MTTANGGTETEEHKRKTNDPFLKHEGQQNMSKSPRLCTPIKKEWSENLPNENVIGNQDNHTNRNYKSKNTDLVSHPHNSRQERNQLTIESKYYGLNREVVSKVEEQFRLSKELKGNDSEIWGLKSLSDKSVNQNSLKVSGDISHMGKAIISNNAHLISSITQSTSSAYHYPQSVKQTRKGKGVICEDLDKSFIIVGAHKSQEDEKPFAAKFQSDTLRRSNVEDDNKPLVEGTVVSGINEINLREWLKCECHKVKKLKKIHIFKQVLETVDFAHSQGLVLLDFQPSCFTLLPSSKIKYIGSYGQQQLGNEVMTCNVNRKRPLEQNTCACQSSSTKQKKLFEETESFRQSHQCSFTHDCRTIVNQTSDTIRPLESRSKESICQNISNCQQTFTKENQFMSASIQLEEKSYCSPEMLNDGVCTLSSNIYSLGVLLFELLCNIESEEAHSTVMLELCHRILPPKFLAENPKEAGFCLWLLHPEPSSRPNARIILESEFIRPSEESSSIDDDGISDDEAETEKLLHFLTSIKKEKIKQAAKLEEQLHLLNEDIQEVERSYSFGTDSVFPLAQMKNSEVRENNLHFQDSSGSDISRSIQRSFGDEERFMANISQLENSYFSTRIQALLKDSPISSNYKNLMENRWRLPQGEHANKEPRRIHNSVGCLGSFFEGLCKFARYSKFEERGRLRNRDLLSSSNVMCALSFDRDEDYMAAGGVSKKIKIFDLNAISSDSVDIQYPVVEMTNKSKLSCVCWNTSIKNHLASTDYDGVVQMWDAESGQPLSQYTEHQKRAWSVHFSLADPKMFASGSDDCSVKLWNISEKNSLGTIRNAANICCVQFSSYSTNLLFFGSADFKVYGYDLRHTRIPWCTLTGHGKAVSYVKFIDAEAVVSSSTDNSLKLWDLKKTSSTGLSSDACALTYKGHSNEKNFAGLSVLDGYIACGSESNEVYCYHKSLPVPIAAHKFESIDPISGHLSSGDNNGHFVSSVCWRKKSNMLVAANSVGIVKLLQMV* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1161 1006 ProSitePatterns Trp-Asp (WD) repeats signature. 757 771 IPR019775 -
Pvu10g1161 1006 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 866 899 - -
Pvu10g1161 1006 Coils Coil 527 554 - -
Pvu10g1161 1006 MobiDBLite consensus disorder prediction 1 35 - -
Pvu10g1161 1006 ProSiteProfiles Trp-Asp (WD) repeats profile. 737 779 IPR001680 GO:0005515
Pvu10g1161 1006 PANTHER LIGASE COP1, PUTATIVE-RELATED 1 66 - -
Pvu10g1161 1006 PANTHER LIGASE COP1, PUTATIVE-RELATED 62 1006 - -
Pvu10g1161 1006 MobiDBLite consensus disorder prediction 48 82 - -
Pvu10g1161 1006 MobiDBLite consensus disorder prediction 8 22 - -
Pvu10g1161 1006 ProSitePatterns Trp-Asp (WD) repeats signature. 884 898 IPR019775 -
Pvu10g1161 1006 PRINTS G protein beta WD-40 repeat signature 757 771 IPR020472 -
Pvu10g1161 1006 PRINTS G protein beta WD-40 repeat signature 800 814 IPR020472 -
Pvu10g1161 1006 PRINTS G protein beta WD-40 repeat signature 884 898 IPR020472 -
Pvu10g1161 1006 PANTHER PROTEIN SPA1-RELATED 2 1 66 IPR044630 GO:0009640
Pvu10g1161 1006 PANTHER PROTEIN SPA1-RELATED 2 62 1006 IPR044630 GO:0009640
Pvu10g1161 1006 SUPERFAMILY WD40 repeat-like 692 1002 IPR036322 GO:0005515
Pvu10g1161 1006 MobiDBLite consensus disorder prediction 49 72 - -
Pvu10g1161 1006 ProSiteProfiles Trp-Asp (WD) repeats profile. 780 822 IPR001680 GO:0005515
Pvu10g1161 1006 Gene3D Transferase(Phosphotransferase) domain 1 238 503 - -
Pvu10g1161 1006 Gene3D - 664 1006 IPR015943 GO:0005515
Pvu10g1161 1006 SUPERFAMILY Protein kinase-like (PK-like) 240 496 IPR011009 -
Pvu10g1161 1006 Pfam WD domain, G-beta repeat 865 897 IPR001680 GO:0005515
Pvu10g1161 1006 Pfam WD domain, G-beta repeat 774 813 IPR001680 GO:0005515
Pvu10g1161 1006 ProSiteProfiles Protein kinase domain profile. 93 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1161 1006 ProSiteProfiles Trp-Asp (WD) repeats profile. 866 906 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 859 897 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 958 1004 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 731 770 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 773 813 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 685 720 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 816 855 IPR001680 GO:0005515
Pvu10g1161 1006 SMART WD40_4 908 947 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1161 Pvu-Chr10 37424542 37431053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1161 777 961 Miscellaneous Gene Families AT5G08390 26.738 1.60e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1161 K16240 - gmx:100799267 1566.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1161 10 37424542 37431053 Pvu10g1161 10 37424542 37431053 ECH