Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1156 ATGGCGGCCTTCGACCACTTCGGGAACATGTACGACGTTGCATTCAAACCCCGCTTGCTTCTCTCCATCATTAGAGACCATATTCCGGATGAGAAGCGTGCCTTCTCCAGCAACTTCCAACTCTCCAAGGTCGTGTCACTCGTCAAAACGCACTCCCTTCTCTCTGAGTCTTTCCTGGTAGACTCCACGCCTCCCAAAATAATCGAAGCCTGGAAGTCTGCATTCTCTTCCTGGCTCAACCGCATCTTCTCCCTCCTGTCCACCTCCATGCCTGATAAACGCTGGGCGGGGATCTCTCTGCTCGGGGTTACTTGTGAAGAGTGCAGCTCTGAGCGTTTTCTAGAATCTTACTCTGTGTGGTTCAACAAGTTGTTAGCTTTTCTACAGTCACCAGCAGATTCAAATTTAGTGAGGGTAGCGGCTTGTGCTTCAATGTCTGATTTATTTTTAAGGTTAGGTCGATATCCAAAGATCAAGAAAGAATCATCTTCCTGTGCCGTTAAAGTTGTTCAGCCTACATTGAAGATGTTAACTGATGAGAACTCCGAGGCAATATGGGATGCTGCAGTTCATTTGTTATGCACCATAGCAACTTCATTTCCGTTTTCTATTCGTAATCATTATGATAGTGTTGAATCTGCTGTCGCTTTAAAACTTTTGTCTGGAGGATGCAGTCTTGATATGTCGAAGAAACTCATCCGTTGCATTGCACTGCTTCCAAAATCGAAAGGAGACACTGAAAGCTGGTCAGTGTTGATGCAGAAAATTTTGGTGTTAATAAATGATCAATTAAATCTAGCCTTTCATGGGCTAGAAGAAGAAACCATGCGTGACAGTGTTACTAGGCTGCTGGTTTTACCAGGAAAACATCCTCCGCCACCGTTGGGAGGCTACATATTGGCAGAAGAAGTTAGAAACAAGGCATCACAAATGACTGAGCAATCACTGATCTCTAATGTATCTGCCCTTATGTTGGGCTGTTGTCTAATGCTTACAAATTCATATCCTGCTAAGGTAAATGTTCCTGTTCGCCTATTATTGGCCCTGGTTGAGAGGATTCTGAAGGTAAATGGCTCTTTGCCACAAATGTCATTGCCATTCATGACTGCCAAGCAGCAAGAGAACATTTGTTCAGAACTTCCAGTTTTGCACTCGAGTAGCCTGGAATTGATCACAGCTATCATAAAGTGTACGGGCAGTCAACTATTACCATATGCTGCCAGTGTTGTACGTATCATTACGAAGTACTTCAAGACATGTGAGTTGCCAGAGTTAAGGATTAAGTTCTATTCAGTCGCGAGGGATTTGTTCATAACCATGGGTGCTGGAATGGCTTTATACCTTGCACAGGAAGTTGTCAACAATGCTTTTACTGATTTAAATAGTACTGAGCATATGGATGGTGGCATATTAAATGGTTCAAATTCAAATGCCTCTGCTGGAGCACAGCAACCGCCCAGTCATAGAAAAAGGAAGCACAGCAGTGCAACGGGATCCCTTCAGGAGCACGATGAAGGAGGTGGTTCAGGCGTGGAAGTTCCCAAGAATCGTCCATTGACTCCAATTTCTCTGAGAATAGCTGCACTCGAGACATTAGAGGCTCTTCTTACTGTGGCTGGAGCTTTAAAATCTGCACCATGGAGATCAAAACTTGATAGCCTTTTGATAGTCATTGCAACGGATTCTTTTAAGGAAGGAACAGTTTCTGAAGAACCTGCTGCCACTGTCACAGATTTGCAGCTTGCTGCATTGCGGACTTTACAAGCATCCTTTCTTTCATTTATTCGAGAAAGACCTCCATATTTTTCTCAGGGTCTTGAACTTTTCCGTAGAGGGAAGCAACAAACTGCTGTGCCAAAGCTAGCTGAGTTCTGTGCCCATGCTCTGTTAACCTTGGAAGTGCTGATACATCCTAGGGCACTTCCATTGGTAGATTACGCCTATGCTGTTAACAATTCATCGGGTGAAGCCCATGGTAGTCTCCAACATGAATATTCTGGCCGAAGCAACAGTACCCCATTTGGTTTACCGCAAGATCCTCCTGACTCCGATGATGATCTTTGTGCTAGATGGCTTGAAACTGGCAAAGAAGATGATGTGTCAATGGGTAAAGATGCAGAAAACAACCAAAAGCCTTCTGAAGCTTGCAGAGATAATGATCCTATAGTGCTTCCTGTGCATGTATCTTCTGACAAGGAGAGGACCCAGATGGATTCTGAGGCTGCCACCCCTGCTGCAGATGTTGAAATGAAAACTGTTGAGGATGAAACCAATTTGAAGTTAGATCAACCTGGAGAATCCGTGGTGCAATTTCAGGAACCTGGATCATGCACCACAAACATCCCATTGGTTGAAGCTCACAATGGTACATTTGATGATGTAGTGTCTGAGAAGATTCTTTCAGGGAGCACTGTTCCTCATAATGAAGCCAGTCATATGGAATCAGACCAAGGAAACTCTGTTAACGAAGACTTTGCATTTGCTTCTCAGAGTAATAGCTTATGGCAAACAACCTCAGACTCTAATATTTTTCAGGATTTTGCTTTTAAATTGGATCATGGCAATCCACTGGCAGATGAAGATGGTTTTCCTGATATTGTGGATGGAGATCCAGATTCTGATTCCGAATAA 2631 0.4382 MAAFDHFGNMYDVAFKPRLLLSIIRDHIPDEKRAFSSNFQLSKVVSLVKTHSLLSESFLVDSTPPKIIEAWKSAFSSWLNRIFSLLSTSMPDKRWAGISLLGVTCEECSSERFLESYSVWFNKLLAFLQSPADSNLVRVAACASMSDLFLRLGRYPKIKKESSSCAVKVVQPTLKMLTDENSEAIWDAAVHLLCTIATSFPFSIRNHYDSVESAVALKLLSGGCSLDMSKKLIRCIALLPKSKGDTESWSVLMQKILVLINDQLNLAFHGLEEETMRDSVTRLLVLPGKHPPPPLGGYILAEEVRNKASQMTEQSLISNVSALMLGCCLMLTNSYPAKVNVPVRLLLALVERILKVNGSLPQMSLPFMTAKQQENICSELPVLHSSSLELITAIIKCTGSQLLPYAASVVRIITKYFKTCELPELRIKFYSVARDLFITMGAGMALYLAQEVVNNAFTDLNSTEHMDGGILNGSNSNASAGAQQPPSHRKRKHSSATGSLQEHDEGGGSGVEVPKNRPLTPISLRIAALETLEALLTVAGALKSAPWRSKLDSLLIVIATDSFKEGTVSEEPAATVTDLQLAALRTLQASFLSFIRERPPYFSQGLELFRRGKQQTAVPKLAEFCAHALLTLEVLIHPRALPLVDYAYAVNNSSGEAHGSLQHEYSGRSNSTPFGLPQDPPDSDDDLCARWLETGKEDDVSMGKDAENNQKPSEACRDNDPIVLPVHVSSDKERTQMDSEAATPAADVEMKTVEDETNLKLDQPGESVVQFQEPGSCTTNIPLVEAHNGTFDDVVSEKILSGSTVPHNEASHMESDQGNSVNEDFAFASQSNSLWQTTSDSNIFQDFAFKLDHGNPLADEDGFPDIVDGDPDSDSE* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1156 876 MobiDBLite consensus disorder prediction 854 876 - -
Pvu10g1156 876 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 874 - -
Pvu10g1156 876 MobiDBLite consensus disorder prediction 683 714 - -
Pvu10g1156 876 SUPERFAMILY ARM repeat 75 561 IPR016024 -
Pvu10g1156 876 MobiDBLite consensus disorder prediction 468 516 - -
Pvu10g1156 876 MobiDBLite consensus disorder prediction 468 484 - -
Pvu10g1156 876 MobiDBLite consensus disorder prediction 657 719 - -
Pvu10g1156 876 MobiDBLite consensus disorder prediction 657 677 - -
Pvu10g1156 876 Pfam rRNA processing/ribosome biogenesis 31 221 IPR012583 -
Pvu10g1156 876 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 874 - -
Pvu10g1156 876 Gene3D - 54 580 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1156 Pvu-Chr10 37327082 37339609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1156 - - gmx:100800871 1325.84