Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1155 ATGCCCACGGGACTAACGGCGGCTCACGCCGCCGTTGCGACCGACGACGAGGGCTGGGTATGGGCGCAGATCAAGGCGGAGGCTCGCCGCGACGCCGAGTCGGAGCCGGCGCTGGCGAGCTACCTCTACTCGACGATCCTCTCGCACTCCTCGCTCGAGCGTTCTCTCTCGTTCCACCTCGGGAACAAGCTCTGTTCTTCTACGCTACTCTCCACTCTCCTCTACGACCTCTTCCTCAACGCATTCTCCTCCGATCCCTCCCTCCGCTCAGCAGCCGTCGCCGACCTCCGCGCCGCCCGCGAACGCGACCCTGCCTGCGTCTCGTACTCTCACTGTCTCCTCAATTACAAAGGCTTCCTCGCCTGCCAGGCGCACCGTGTGGCACACCTTTTGTGGCGGCAGTCGCGGCGGCCGTTGGCATTGGCTCTGCACTCTCGGATTGCTGATGTGTTTGCGGTGGATATTCACCCGGCGGCGAGGATTGGGAAGGGGATTTTGTTTGATCATGCCACTGGGATGGTGGTGGGGGAGACAGCGGTGATTGGGAACAATGTGTCGATTCTGCACCATGTTACGCTGGGCGGGACTGGCAAGGTTGGTGGTGACAGGCATCCCAAGATTGGGGACGGGGTGCTTATTGGTGCTGGTGCTACAATTCTGGGAAATATTAAGATTGGGGAAGGTGCAAAGGTTGGTGCTGGCTCGGTGGTTTTGATTGACGTGCCGCCACAGACCACTGCAGTTGGCAACCCAGCCAGGTTGGTTGGTGGGAAGGAGACACCTTCTAAGCATGAGGATGTGCCTGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCAGATTATATCATTTGA 861 0.5912 MPTGLTAAHAAVATDDEGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDPSLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIADVFAVDIHPAARIGKGILFDHATGMVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPQTTAVGNPARLVGGKETPSKHEDVPGESMDHTSFISEWSDYII* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1155 286 CDD LbH_SAT 151 251 IPR045304 -
Pvu10g1155 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Pvu10g1155 286 PANTHER SERINE ACETYLTRANSFERASE 13 286 - -
Pvu10g1155 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu10g1155 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Pvu10g1155 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu10g1155 286 SUPERFAMILY Trimeric LpxA-like enzymes 19 256 IPR011004 -
Pvu10g1155 286 Gene3D Hexapeptide repeat proteins 154 274 - -
Pvu10g1155 286 TIGRFAM cysE: serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pvu10g1155 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1155 Pvu-Chr10 37321708 37323462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1155 20 274 Miscellaneous Gene Families AT2G17640 56.471 3.26e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1155 K00640 - gmx:547632 546.969