Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1152 ATGAAGGCTCTAAGACTTCTCTTCATGATTATTTTTCTTGGTTCATTCTTCCTTGAAAGCCCAGAAGCAGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCTATCCCCTTTGATACAACCAACCTTCACTGCCTTTCTGTTTGGGATGCCCAAAGTTTCATTCTCAGATATGCTCAGACTTATGCAAACATTTGGAGTTTTATTCTCTCAACCCCCGACACAAATTCTTACATAGCTATGGGATTCTCTGTCAGTGGCGGCATGGTTGGTTCAAGTGCCATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACTTCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTGATAGCCAATTCAACCTTCATCACTTTACAGTCCTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCGCTGAACCTTTGTCCTCGCTGATATTTGCCACTGGATCCACCGGTCTATTCCCTGCACCACCAAGCTTTGCACTAACCAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGCCAACATCGGAAGTTCACAAGGAGATGGAAATTCTTCACAAGTAGATGGAAGTACTTCGCAGGCAGCAGACTCCTGTGTCTCCAAGCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCGGGGATACATCCTTAGATATTCTCAGACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCGAACACAAATTCTTATATAGCAATGGGGTTCTCTCCCAATGGAGGCATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAGTGGGGCTGGTGGAGGCATGAAACAGTATTATCTAACAGGACTTGCACCAAACCAAGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTAGAAACCAACCAACCTCTGTCCCGGTTGATTTATGCCTTTGGACCTAACGGTGTGTTCCCTTCAACACCAAGTTTTGCATTAACGCAGCACCAAGACAAAGTCTCCATTACGTTGAATTACGCAACAGGTTCAAATGCATTAGGAAACTCATATATGAACCTGAAAAGAAGCCATGGAGTGTTGAATATATTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGTTACTTCAGAGAATGGGATCCATTTTGGTTTTATTTTCACGCTTCAGTTCAATCCTTGGGTTTTGTTCTGGGAGTAATTGGTGTAATTAGTGGTTTTGTGTTGAATAATCAACTCCATGTCGACGTTAGTCTTCACAAGGCTCTTGGAATCCTCATTTTCGTTCTAGCTTGCCTCCAGATAATGGCTTTGATTGGTCGACCAAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATTTATACCACCATAACACGGGGAGAATTTTGATTATACTAGCCGTGGCTAACATTTTCTATGGAATCCAATTAGGGAAGGAGGGAAGTGGATGGAATATAGGTTATGGGATTGTGCTGGCCATATTACTCACAATGGCACTTACTTTTGAGACACAACTATGCAGTAAAGACTAA 1668 0.4365 MKALRLLFMIIFLGSFFLESPEADSCTSNLSLNVSIPFDTTNLHCLSVWDAQSFILRYAQTYANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGVTSNQVVPDKGNLQVIANSTFITLQSSRLFMVFQLQTAEPLSSLIFATGSTGLFPAPPSFALTKHLDKVSTRIDYSKANIGSSQGDGNSSQVDGSTSQAADSCVSKLNLSVPLLFDTTNLNCLPVWNARGYILRYSQTSPNIWSFILSAPNTNSYIAMGFSPNGGMVGSSAIVGWISSSGAGGGMKQYYLTGLAPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLETNQPLSRLIYAFGPNGVFPSTPSFALTQHQDKVSITLNYATGSNALGNSYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHASVQSLGFVLGVIGVISGFVLNNQLHVDVSLHKALGILIFVLACLQIMALIGRPKKESKVRKYWNLYHHNTGRILIILAVANIFYGIQLGKEGSGWNIGYGIVLAILLTMALTFETQLCSKD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1152 555 CDD Cyt_b561_FRRS1_like 377 548 - -
Pvu10g1152 555 CDD DOMON_DOH 44 180 IPR045266 -
Pvu10g1152 555 CDD DOMON_DOH 245 377 IPR045266 -
Pvu10g1152 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 12 197 - -
Pvu10g1152 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 211 554 - -
Pvu10g1152 555 ProSiteProfiles DOMON domain profile. 52 164 IPR005018 -
Pvu10g1152 555 SMART 561_7 399 520 IPR006593 -
Pvu10g1152 555 PANTHER BNAC01G39800D PROTEIN 211 554 - -
Pvu10g1152 555 PANTHER BNAC01G39800D PROTEIN 12 197 - -
Pvu10g1152 555 ProSiteProfiles Cytochrome b561 domain profile. 363 555 IPR006593 -
Pvu10g1152 555 Gene3D - 375 552 - -
Pvu10g1152 555 SMART DOMON_3 78 164 IPR005018 -
Pvu10g1152 555 SMART DOMON_3 270 356 IPR005018 -
Pvu10g1152 555 ProSiteProfiles DOMON domain profile. 244 356 IPR005018 -
Pvu10g1152 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1152 Pvu-Chr10 37295695 37302678 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1152 - - gmx:100803524 999.579