Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1148 ATGTTCTTCAGTTTTGCACTGTCACCACCACCTCTAGGTTCCAACATGTCGGAGAAGAAGAAGAGTATGCGTAGAAGGAGTATTGTTGGGGCGAGCAAAAAGCCACAACCTTTGGTGGAAGTGGAAGACATAGAGGACGCTATTTCCTTCTCCAAAGACGAGACTCACAAACTGAGAGTGTCCCTTTTGGACTGGTACGACCTAAACCGCAGGGACCTTCCTTGGAGAACACATCACCGTGAAGATGAAGAAAAACAAGAAGAAGAATTGGAAAGAAGAGCTTATGGGGTGTGGGTCTCGGAGGTTATGCTCCAGCAAACAAGGGTTCAGACTGTTATTGCATATTACAATCGTTGGATGCAAAAATGGCCCACCATTTACCATCTTGCACAAGCTTCTCTCGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTACCGAAGAGCTCGTTTTCTTTTAGAGGGGGCAAAGAAAGTAGTTGCAGAAGGTGGCAAAATTCCTAAAGTGGCTTCTATGCTACTAAAGATTCCTGGAATTGGAGACTACACATCTGGAGCAATTGCTTCTATTGCATTTAAAGAGGTGGTACCTGTTGTTGATGGAAATGTGGTAAGGGTGATTGCTAGACTAAGGGCTGTTTCTACGAATCCAAAAGACTCGGCGACCGTTAAGAGATTTTGGAAATTAGCAGCTCAGTTGGTTGATCCCGTTCGTCCTGGGGACTTCAATCAGGCTCTCATGGAACTTGGGGCAACTGTATGCACCCCTTTGAACCCAAGCTGTTCCTCATGTCCAGCATCAGAATTTTGTCAAGCACTATCAAATGCTAAACATGATACTGCAGTAGCAGTTACAGATTATCCTGTTAAGGGTGTGAAGGTTAAACAAAGACGTGATTTCTCTGCTGTATGTGTTGTTGAATTACTTGGCGCTGAAGCATTGTTAGACAAAAACCAGTCCATTAGCAAGTTTATTCTTGTTAAAAGGCCTGAAGAAGGGTTGCTTGCTGGTCTCTGGGAGTTTCCATCTGTCTTACTGGATGGAGAAACAGTTCCATTGACGACTAGAAGAGAAGCAATGGACCGCTTCTTGAAAGCAAATTTCAAAATTGATGTCAGAAAGACTTGCAATATAGTTTTGAGGGAAGATATAGGGGAATTTGTTCACATTTTCAGTCACATTCGCCTCAAGTTGTATGTTGAATTGCTAGTGTTACAATTTAAAGAAGGAGGAGAAGATGATTTGTTCAAAAGCCCAGATAATAAACCAACTTGGAAGTGCGTTTACAGCAATGCACTTTCTGGTATGGGACTGACAACAAGTGTAAGAAAGGTGTACAACATGGTTCAAAACTTTAAGCAGAAAGCTCTTCCTTCTAACCATGTGCCAACCAAAAAGAGAACCAGAAGAACACAAAGAAGCTAG 1428 0.4279 MFFSFALSPPPLGSNMSEKKKSMRRRSIVGASKKPQPLVEVEDIEDAISFSKDETHKLRVSLLDWYDLNRRDLPWRTHHREDEEKQEEELERRAYGVWVSEVMLQQTRVQTVIAYYNRWMQKWPTIYHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKVVAEGGKIPKVASMLLKIPGIGDYTSGAIASIAFKEVVPVVDGNVVRVIARLRAVSTNPKDSATVKRFWKLAAQLVDPVRPGDFNQALMELGATVCTPLNPSCSSCPASEFCQALSNAKHDTAVAVTDYPVKGVKVKQRRDFSAVCVVELLGAEALLDKNQSISKFILVKRPEEGLLAGLWEFPSVLLDGETVPLTTRREAMDRFLKANFKIDVRKTCNIVLREDIGEFVHIFSHIRLKLYVELLVLQFKEGGEDDLFKSPDNKPTWKCVYSNALSGMGLTTSVRKVYNMVQNFKQKALPSNHVPTKKRTRRTQRS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1148 475 CDD ENDO3c 95 251 IPR003265 GO:0006284
Pvu10g1148 475 PANTHER ADENINE DNA GLYCOSYLASE 37 470 IPR044298 GO:0006284|GO:0016798
Pvu10g1148 475 SUPERFAMILY DNA-glycosylase 58 276 IPR011257 GO:0003824|GO:0006281
Pvu10g1148 475 Pfam NUDIX domain 324 446 IPR029119 -
Pvu10g1148 475 Gene3D - 57 273 IPR023170 -
Pvu10g1148 475 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 294 457 - -
Pvu10g1148 475 CDD DNA_Glycosylase_C 298 450 IPR029119 -
Pvu10g1148 475 Gene3D Hypothetical protein; domain 2 72 198 - -
Pvu10g1148 475 SMART ccc3 254 274 IPR003651 GO:0051539
Pvu10g1148 475 Pfam HhH-GPD superfamily base excision DNA repair protein 99 231 IPR003265 GO:0006284
Pvu10g1148 475 SUPERFAMILY Nudix 289 450 IPR015797 -
Pvu10g1148 475 SMART endo3end 103 253 IPR003265 GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1148 K03575 - gmx:100818278 796.193