Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1135 ATGGCTCTCCCTTTGCTACCTTTATCAGTGGAAGAACTTTGTCAAAGTGAAAAAATAAGCAAAATGGGTACCCTTAAGGTATCCAACAGTTTATGCAGATTTTCAAAAATCTTAGTAATTTGCATGGTGGCATTTTCTTTGGTTGATTCAAGTTATTGTGTGTGTGAGTTTGAGGCAATCTTCAATTTTGGGGATTCAAATTCGGATACGGGTGGGTTTCATACAGCTTTTCCTGCACAGCCTGGTCCCTATGGAATGACTTATTTCAAAAAACCAGTTGGTCGTGCTTCTGATGGAAGGCTCATTCTTGATTTTCTTGCTGAGGGTCTTGGACTTGCACATTTGAGTCCATATCTTGAGTCTATTGGATCAGACTATAGTCATGGAGCTAACTTTGCATCTTCAGCCTCCACTGTGATTCCCCCCATTGCTTCCTTCTTTCTCAGTGGACTCAGTCCATTTTCCCTTTCCATTCAACTCAGTCAGATAAAGCAATTCAAAGCCAGAGTTGATGAACTTCATCAAACAGGAACTATATCATCATCTGGTCGTTCCTCAGGAACTAAAATTCCTTCTTCACCAGATATATTCAAAAAGGCTATTTACATGTTCTATATTGGCCAAAATGATCTCACTTCCAAAATAGCAGCCACTGGTAGTATTGATGGAGTGAGGGACAGCTTTCCTCAAATTGTTTCACAAATTAATGATGCTATCAAGGAGCTATATGCATTAGGGGCACGCACATTTATGGTATTCAATCTTGGTCCTGTGGGATGCTATCCAGGATATTTGGTGGAGCTTCCTCATGCTAGTTCTTTTGACTTTGATGAGTTTGGATGCATGATTTCTTACCAGAATGTTGTAAATTACTATAACAAATTGTTGAAGTGGACATTGAGCCAAACCAGAGAAAGATTAGCAGATGTTTCCCTCATCCATGTAGACACTCACTCTGCTTTGTTGGAGCTCTTTCACCATCCCACACTTTATGGATTTAAGTATGCTACCAAAACATGTTGTGGGTATGGAGGGGGTGACCACAACTTTCATCCCAAAATTTTGTGTGGTAATGTGCTAGCAAGTGCTTGTGCTGAGCCCCAAGAATATGTGAGTTGGGATGGAATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCACATGCTATTCTAAATGGTTCTCTTTTTGACCCCCCTTTCCCTCTCCATGAACGTTGTGATCTACAACCTATTGGTTGA 1239 0.4052 MALPLLPLSVEELCQSEKISKMGTLKVSNSLCRFSKILVICMVAFSLVDSSYCVCEFEAIFNFGDSNSDTGGFHTAFPAQPGPYGMTYFKKPVGRASDGRLILDFLAEGLGLAHLSPYLESIGSDYSHGANFASSASTVIPPIASFFLSGLSPFSLSIQLSQIKQFKARVDELHQTGTISSSGRSSGTKIPSSPDIFKKAIYMFYIGQNDLTSKIAATGSIDGVRDSFPQIVSQINDAIKELYALGARTFMVFNLGPVGCYPGYLVELPHASSFDFDEFGCMISYQNVVNYYNKLLKWTLSQTRERLADVSLIHVDTHSALLELFHHPTLYGFKYATKTCCGYGGGDHNFHPKILCGNVLASACAEPQEYVSWDGIHFTEAANKIVAHAILNGSLFDPPFPLHERCDLQPIG* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1135 412 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 26 410 - -
Pvu10g1135 412 CDD SGNH_plant_lipase_like 59 394 IPR035669 -
Pvu10g1135 412 Pfam GDSL-like Lipase/Acylhydrolase 60 390 IPR001087 GO:0016788
Pvu10g1135 412 SUPERFAMILY SGNH hydrolase 196 392 - -
Pvu10g1135 412 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 26 410 - -
Pvu10g1135 412 Gene3D SGNH hydrolase 53 394 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1135 Pvu-Chr10 36954761 36957579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1135 59 401 Acyl Lipid Metabolism Gene Families AT4G10950 27.731 1.11e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1135 - - gmx:100814956 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1135 10 36954761 36957579 Pvu10g1135 10 36954761 36957579 ECH