Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1129 ATGAAGGATTCGAATTCGGATCTGTTTGACCCGGTCGTGGCCATGGAGTCCGAGTGGTCCCGCGGCGGTTCTACTTCCGACGCCGATTTCGCCTTCGCTTTCAACGACAGTAACTTCTCCGACAGGGTTCTCCGGATCGAGATCATGCCTGACCCGGTTGATGCCCGACCCGATACTGATGGCTGCACCACCATTGCCGACTGGGCGCGCCACCGCAAGCGCCGCCGCGAGGATGTAAAAAAGGATAACGGTGTGGATATTGCTTCGGTGCCAGACGAGCAAATATTGAACGGGAATCAGCCTGATTTGGATGAGTGTGAAAACCAAGATGAGGATGCTGTTGCAATGGTTGAAGAACCCAATTCTGGTGATGAAGCTACCAACAGTATTGATTCAGACTGGAGCATGGACTGCTCTGCAGGTGCAGTTGTAAGAGTTAAAACGCTGCACATAAGTTCTCCTATTCTGGCTGCAAAAAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAGAGAATCTGAGCAGAGACATGTCACCCTCCGAATTAATGCTTCTGAAGAAGCTGCTCTCATGGAGCTGCTGAATTTTATGTACAGTAACACCTTGAATACTACTACTACAGCACCTGCTTTACTGGATGTGTTGATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGATGCTGTAGCCGGTTATTGCGGAATATGCCTATGACACCTGACTCTGCATTGCTTTATTTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGGTACAAGGATATAACCAAGTTCCAGGAAGAGGTTTTGGCCTTGCCCCTAGCTGGAATAGAGGCAATACTGTCTAGTGATGATCTCCAGGTTGCCTCAGAAGATGCTGTATATGATTTTGTGCTGAAGTGGTCGCGACTGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGTTCCCGTCTAGCTCGTTTAATTCGCTTCCCTTACATGACCTGTCGAAAGCTTAAGAAGGTCTTGACCTGTTCTGACTTCGACCATGATGTTGCTTCTAAACTTGTACTGGAGGGCCTATTTTTCAAGGCTGAGGCTCCGCACCGTCAGCGGGCACTGGCTGCGGAAGACTCCGCATCTTCAAATCATCGTTTTGTGGAGAGGGCATACAAATATCGCCCTGTGAAGGTGGTAGAATTTGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATCTGAAGCGGGAGGAGTGCGCCAATCTATTCCCATCGGGCCGAGTTTATTCTCAGGCATTCCATTTGGGTGGTCAAGGTTTTTTCTTATCAGCACATTGCAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGCTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCAAGGTCTAGGCCAACAGAGGAATTTGTTAGCAAGTACAAAGGCAACTATGTGTTCACAGGGGGAAAGGCTGTTGGGTACAGAAACTTGTTTGCTATACCATGGACATCCTTCATGGCTGAGGATAGTCTTTACTTTATCAACGGTGTCCTCCACCTTAGAGCTGAGCTCACCATCAGACACTGA 1656 0.4819 MKDSNSDLFDPVVAMESEWSRGGSTSDADFAFAFNDSNFSDRVLRIEIMPDPVDARPDTDGCTTIADWARHRKRRREDVKKDNGVDIASVPDEQILNGNQPDLDECENQDEDAVAMVEEPNSGDEATNSIDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLNTTTTAPALLDVLMAADKFEVASCMRCCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVLALPLAGIEAILSSDDLQVASEDAVYDFVLKWSRLQYPKLEERREVLGSRLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNHRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1129 551 Pfam BTB And C-terminal Kelch 262 354 IPR011705 -
Pvu10g1129 551 Pfam BTB/POZ domain 147 236 IPR000210 GO:0005515
Pvu10g1129 551 Gene3D Potassium Channel Kv1.1; Chain A 128 256 IPR011333 -
Pvu10g1129 551 SMART BACK_2 254 356 IPR011705 -
Pvu10g1129 551 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Pvu10g1129 551 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 551 - -
Pvu10g1129 551 CDD BTB_POZ_ZBTB_KLHL-like 143 222 - -
Pvu10g1129 551 PANTHER OS02G0260700 PROTEIN 6 551 IPR045890 -
Pvu10g1129 551 SUPERFAMILY TRAF domain-like 438 549 - -
Pvu10g1129 551 SUPERFAMILY POZ domain 147 236 IPR011333 -
Pvu10g1129 551 Gene3D - 271 376 - -
Pvu10g1129 551 SMART BTB_4 111 239 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1129 Pvu-Chr10 36917557 36921214 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1129 - - gmx:100776595 1014.6