Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1128 ATGAAGGGGAAGTTGGTGGAGGGGAGGGTGGTGTTGATTCGAAAGAGTGTGGTTGAAAACCTAACCAACCCATTTGGCGAAGAAGAGTTGAAGAATTTAAGGGGAGATGGAACTGGAAAGCGTGAGAAATGGGATAGGATTTATGACTATGATGTCTATAATGATCTGGGCTTTCTAACCAGAGATGGGCAACATGATCACCCAGTTCTTGGAGGCATAAAATATCCTTACCTCGTAGGGTTAGGACTGGGAGAAAACTCCTCCACAATAACAAGAATGGTGCTGAGTACGAGGAACCAGACGAAGTTCATCACGTGCCAAGAGATGAAAATTTCAGTAACATGA 345 0.4406 MKGKLVEGRVVLIRKSVVENLTNPFGEEELKNLRGDGTGKREKWDRIYDYDVYNDLGFLTRDGQHDHPVLGGIKYPYLVGLGLGENSSTITRMVLSTRNQTKFITCQEMKISVT* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1128 114 SUPERFAMILY Lipoxigenase 24 77 IPR036226 -
Pvu10g1128 114 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 12 114 IPR013819 GO:0016702|GO:0046872
Pvu10g1128 114 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 23 78 - -
Pvu10g1128 114 PANTHER LIPOXYGENASE 23 78 IPR000907 GO:0016702|GO:0046872
Pvu10g1128 114 Pfam Lipoxygenase 26 78 IPR013819 GO:0016702|GO:0046872
Pvu10g1128 114 Gene3D - 15 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1128 Pvu-Chr10 36873995 36874657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1128 27 77 Acyl Lipid Metabolism Gene Families AT1G17420 58.824 1.20e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1128 K15718 K00454 pvu:PHAVU_010G108000g 234.958