Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1122 AAATTTATCGCTTTTGTTACAACAGAAGCAGAGACCGACCAACCTGAGGAGGATTTGAAGCCTGGTATTGACCTTCTTGGATCTGTAAATGAGAAATTCTATGACATGTATGACAGGTTTGAACCCTGCAATGATCATGAGGTTGATGGTTGTTTCATCTCTACTAGTTATGATCCTACCACACACTTTGAAATCACAGTTAAAGACGTGGTCGGGATGTACAGTAAAATCACTGGAAAGCATCACTTTTGTCTTTTGTTTCAAATTCTTGATCTTTCTGTCGACCTGAGTGCCGCAAGTGCTACAACTGAAGAATGA 318 0.3994 KFIAFVTTEAETDQPEEDLKPGIDLLGSVNEKFYDMYDRFEPCNDHEVDGCFISTSYDPTTHFEITVKDVVGMYSKITGKHHFCLLFQILDLSVDLSAASATTEE* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1122 105 SUPERFAMILY FAD/NAD(P)-binding domain 42 81 IPR036188 -
Pvu10g1122 105 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 1 33 - -
Pvu10g1122 105 Pfam GDP dissociation inhibitor 1 81 IPR018203 GO:0005092|GO:0007264
Pvu10g1122 105 Gene3D - 34 89 IPR036188 -
Pvu10g1122 105 PRINTS Rab GDI protein signature 33 52 IPR000806 GO:0005093|GO:0015031
Pvu10g1122 105 PRINTS Rab GDI protein signature 54 74 IPR000806 GO:0005093|GO:0015031
Pvu10g1122 105 PANTHER GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1 104 - -
Pvu10g1122 105 SUPERFAMILY FAD-linked reductases, C-terminal domain 1 41 - -
Pvu10g1122 105 PANTHER RAB GDP-DISSOCIATION INHIBITOR 1 104 IPR018203 GO:0005092|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1122 Pvu-Chr10 36767963 36769212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1122 K17255 - pvu:PHAVU_010G1075001 219.55