Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1120 AAGAATCAGCCAAATTTGAGTCATCAGAAAGCTCCTAAGACCACTGAGAAAGTTGAACCAAAGGAGAAAACCATTCAGGCATCTGAATATCAAACGAATGAAAACAAGGGTGTTGACTGGAGATATGGATGTCAGAACCAGATAAATGTAAACATGCCCGGTGAAGGTCCAAAAGAGACAAGCGATGCCAGCACAGATGGTGATGAATGCAAGAGTGAAAATAGAAAGGCAGAGAAAGGAGCAGAAAATACGGTGGATACTACTCAATTAAGGGAAGTGAAAGACTCAAGCACACCAACTGATGTTGGTAGTAAAGAGGGAAGAATCTTGTCAGATGAAGATGCTGCTGTTTTGATACAAGCTGCATACCGCGGTTATCAAGTTAGAAAATGGGAACCATTGACGAAACTGAAGCAAATAGATGAAGTCAGAAAGGAGGTGACCAATGTTCAAGATCGTGTTCAAGCTTTTGAGAGATCTTCTGGTCTTCAAAATGATGACAAGCAAAAAATTGCAATTGGAGAGAACATAATGAGACTCCTGCTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTTAGGGAGATCAGAAAATCCTTGGCTAGAGAGCTCACAATCTTGCAAGAAAGGCTTGATTCTTTAATGGCTAACAAACTTCAGCAGCAGATGCAGGATATTCAGAAAGATGTTGAAGTGACTCCAACGAACATGCAGAATGAAGAACATTTGCATAAGGAGGAAGAAGAAAAAGTTGTCATACCAGGAGATTCATCTGAAGGCAATTGTGATGATGGAAATGTATCTCAGTCACCAGTTGATCCTGTACCAAATGAGGGAGCAGAATCTCTTTTTCAAGTCGTTACAGCTGATACATTGAACTCTACAAGTGATATATCCGAGACTGACAAAATGGCTGTGGAACCCGAAGACAAATCAGAAGCGAAAGACATTCCCATTGAGGTTGATAAATTGGATACGACTGTTTGGGAAGAATTGCCAGTGGGAGTTATTGATGAAGATAGCAATGATGCTAGTATTGAGAAGGAAGAACACGATAATATTGGTTCTGGAAGTCTACCAGCCATGGTGAATGATTCTGCACAAGATGGACTAGATTCGGAGAACCATGCAATGATGGAACTTCCGGTGGGACTACTTGATGAAGATGAAAGGGACAATGAAATGAATATTTCTAAAGAAGAAACACAAACTAAAACTGAGATATTTATGGAGGAGCTTCCAGTGGGACTACTTGATGAGAAAACAGAAGAATCTGAAGTTGAGAAGCATGATGAAGCTAAGCCTAAAGAGGTTCTACTAGCTCAAGCAGGGGAATGTAATGAAGATGGGGAAACAAGTTCTTCCACAGATAATACTTCAAAAGCAACTCAACTAGAGCAACAGCAGCAACCACTGAAAGATCAAGAGGTGCAGTCTTCTGGGGAATCAGATGGATGGGTAAAAATTGAGTTCAACAAAGATGAGCTTCAGTCAGGTGAGGGAGTTGGAACTGATATTGAGTCGCCACCTTTGACAACAAATGTCAATGATCGTGAACCAGGAAATGAAGATGTGTGCTTGGAAGCAAATGATGTAAACAACAGCTCACCCGAGCCAATGGAGTTCGTGGCTATAAATGACACACAAAAGGAAGAGGAACCAGAAGGAAAGATTGCAGTCAAGGAGACACAAGAGGATGGTGAAGAGATAGTTGGTGAAACTTGGGGTGAAGAGAAAACTGAACCCTTTGCAACATCAGCTGCATTAGAAGTGGTACCTGTGGCTGATGATGATGAAGGGTTAAAGGGTGAGTCGAAGTTAGTGGAGGAAAATGAGAAGCTAAGGAAGAGGATGAAGAAGTTGGTTGAGGCTGGGAATGAACAGTTAAGTGTAATATCAGATTTAACTGGCAGAGTGAAGGAGTTGGAGAAGAGATTAGCCCGGAGCAGAAGCAAGAGAGTGAAGACAAAACGGTGTAAACCAGCAACTTCCAAAATGTCTAGCATGAAACCACTGAACACGATGTAA 2031 0.4146 KNQPNLSHQKAPKTTEKVEPKEKTIQASEYQTNENKGVDWRYGCQNQINVNMPGEGPKETSDASTDGDECKSENRKAEKGAENTVDTTQLREVKDSSTPTDVGSKEGRILSDEDAAVLIQAAYRGYQVRKWEPLTKLKQIDEVRKEVTNVQDRVQAFERSSGLQNDDKQKIAIGENIMRLLLKLDTIQGLHPSFREIRKSLARELTILQERLDSLMANKLQQQMQDIQKDVEVTPTNMQNEEHLHKEEEEKVVIPGDSSEGNCDDGNVSQSPVDPVPNEGAESLFQVVTADTLNSTSDISETDKMAVEPEDKSEAKDIPIEVDKLDTTVWEELPVGVIDEDSNDASIEKEEHDNIGSGSLPAMVNDSAQDGLDSENHAMMELPVGLLDEDERDNEMNISKEETQTKTEIFMEELPVGLLDEKTEESEVEKHDEAKPKEVLLAQAGECNEDGETSSSTDNTSKATQLEQQQQPLKDQEVQSSGESDGWVKIEFNKDELQSGEGVGTDIESPPLTTNVNDREPGNEDVCLEANDVNNSSPEPMEFVAINDTQKEEEPEGKIAVKETQEDGEEIVGETWGEEKTEPFATSAALEVVPVADDDEGLKGESKLVEENEKLRKRMKKLVEAGNEQLSVISDLTGRVKELEKRLARSRSKRVKTKRCKPATSKMSSMKPLNTM* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1120 676 MobiDBLite consensus disorder prediction 386 540 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 415 439 - -
Pvu10g1120 676 Coils Coil 198 218 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 25 54 - -
Pvu10g1120 676 Coils Coil 605 625 - -
Pvu10g1120 676 SMART BAG_1 139 216 IPR003103 GO:0051087
Pvu10g1120 676 Coils Coil 633 653 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 448 483 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 662 676 - -
Pvu10g1120 676 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 18 671 IPR040400 -
Pvu10g1120 676 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Pvu10g1120 676 Gene3D - 102 127 - -
Pvu10g1120 676 ProSiteProfiles IQ motif profile. 112 141 IPR000048 GO:0005515
Pvu10g1120 676 ProSiteProfiles BAG domain profile. 139 216 IPR003103 GO:0051087
Pvu10g1120 676 MobiDBLite consensus disorder prediction 386 408 - -
Pvu10g1120 676 Pfam BAG domain 140 214 IPR003103 GO:0051087
Pvu10g1120 676 Gene3D BAG domain 128 220 IPR036533 GO:0051087
Pvu10g1120 676 Coils Coil 140 160 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 61 82 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 335 370 - -
Pvu10g1120 676 MobiDBLite consensus disorder prediction 1 86 - -
Pvu10g1120 676 SUPERFAMILY BAG domain 131 215 IPR036533 GO:0051087
Pvu10g1120 676 MobiDBLite consensus disorder prediction 647 676 - -
Pvu10g1120 676 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 18 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1120 Pvu-Chr10 36756871 36759466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1120 - - pvu:PHAVU_010G1074001 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1120 10 36756871 36759466 Pvu10g1120 10 36756871 36759466 ECH