Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1117 AGTCCAAAGAAGGTCAACTTAGTTGCTGCTCTGGTTCGTGGCATGCTTGTTAAAGATGCATTGATGCAGTTGGAATTGACAATAAAACGAGCAGCAAAAATTGTCTATCAGGTCATTCATTCAGCCCGAGCAAATGCCTCTCACAATCACGGGTTAGATCCAGAACGTCTCCTAGTAG 178 0.4382 SPKKVNLVAALVRGMLVKDALMQLELTIKRAAKIVYQVIHSARANASHNHGLDPERLLV 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1117 59 CDD Ribosomal_L22 1 59 IPR001063 GO:0003735|GO:0005840|GO:0006412
Pvu10g1117 59 PANTHER 39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL 1 59 - -
Pvu10g1117 59 PANTHER CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED 1 59 IPR005727 GO:0003735|GO:0006412|GO:0015934
Pvu10g1117 59 Pfam Ribosomal protein L22p/L17e 1 59 IPR001063 GO:0003735|GO:0005840|GO:0006412
Pvu10g1117 59 SUPERFAMILY Ribosomal protein L22 1 59 IPR036394 GO:0003735|GO:0005840|GO:0006412
Pvu10g1117 59 Gene3D Ribosomal protein L22/L17 1 59 IPR036394 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1117 Pvu-Chr10 36711193 36711595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1117 K02890 - gmx:100793854 112.464