Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1101 ATGGCCCTTCTAGTTCACGCCCCTGAAATATCTGTTGCTCTTCAAATTGCCCCAAACCCTAACCCTAGGCTGAGCAAAGTCCACAGCTTCAAACCCCAGACAAAGGGCAAAACGATTGGGTCAGCTCGCGGAGTGAGAGTTTCTTGCAAAGTGAAAGATTATGAAGTTTTGGATTTGGGTTTGGATGAGAGCGTGAACTCGTACGGTCAATTTTCGGCTCCTGTGAAGCCAGGGTCGAAGCAGAGCAAAGAGAAGGAAGAAGAGAAGCAGAATTACCATGTTAATGTGGGATACGCTATTCGAACTTTGAGGGAGGATTTCCCTGATCTCTTCTACAGGGAACTTAGCTTTGACATCTACAGGGATGATATTGTGTTCAAGGATCCAATGAACACGTTCATTGGTATTGAGAATTACAAATCTATCTTCTGGGCACTACGATTCCATGGCAAGGTATTTTTCAAAGCTTTGTGGATTGACATAAGTAGTGTATGGCAGCCTGTTGAGAACGTCATCATGGTTCGCTGGACTGTTCATGGGATCCCACGAGTTCTATGGGAGAGCCGTGGTAGGTTTGATGGAACCTCTGAGTATAAACTTGACAAGCAGGGCAAGATTTTTGAACACAGGGTTGACAACATTGCTACGAATTCACCTCCTCGGTTCAAAGTGTTGAGTGTGGCAGAATTAATTCAGTCTATTGGCTGCCCCTCGACTGCAAGACCTACCTATTTTGAAACATCTTCACATCCCGAGAGAACGTAA 765 0.451 MALLVHAPEISVALQIAPNPNPRLSKVHSFKPQTKGKTIGSARGVRVSCKVKDYEVLDLGLDESVNSYGQFSAPVKPGSKQSKEKEEEKQNYHVNVGYAIRTLREDFPDLFYRELSFDIYRDDIVFKDPMNTFIGIENYKSIFWALRFHGKVFFKALWIDISSVWQPVENVIMVRWTVHGIPRVLWESRGRFDGTSEYKLDKQGKIFEHRVDNIATNSPPRFKVLSVAELIQSIGCPSTARPTYFETSSHPERT* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1101 254 PANTHER - 41 250 - -
Pvu10g1101 254 PANTHER RIKEN CDNA 2310061I04 GENE 41 250 IPR018790 -
Pvu10g1101 254 SUPERFAMILY NTF2-like 115 211 IPR032710 -
Pvu10g1101 254 Pfam Uncharacterized conserved protein (DUF2358) 99 209 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1101 Pvu-Chr10 36467340 36470286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1101 - - vra:106773181 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1101 10 36467340 36470286 Pvu10g1101 10 36467340 36470286 ECH
Pvu6g1141 6 22522388 22523751 Pvu10g1101 10 36467340 36470286 PCT