Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1095 ATGGTAGATAGGGAGCAAGCAAGGCCCTTGGCCCCAGCAATAGAGCGTCCAAGCAGTGAAGAAGATGACACCTCTCTTCAACCCCAAAAACAAGCTCACAAAAAACTCATCAAACGATGTGCATGCCCATTAATCTCTCTACTTCTCCTAGCAATAGTGGTCATAGTTTTGATCTTCACAGTATTTCGTGTCAAGGACCCTGTGATGACCATGAACGGTATCAAAATCACAACGCTGGAACTTTCCAACACCGACATGACCCCTCAATCCGGGGCCAACATGTCCTTAGTCGCAGATGTGTCAGTGAAAAACCCCAACGTTGCATCCTTTAAGTATAGCAACACCACCACGAGTTTGTACTATCGTGGTATCATGGTGGGGGAGGCAAGACTACCGCCTGGGAGGGCCAAGGCCAGAAGAACAATAAGGATGAATGTAACCATTGATGTGATCACGGATCGTCTGGTTTCTAGCCCGGATTTCAGAACGGATCTTGGTTCAGGGTTGATGACTATGAGTAGCTTCTCTAGAGTTCCGGGGCAGGTGAAGATCTTGAACTTGTTTAAGAGACATGTTGTTGTGAAAATGAACTGCTCCACCACTTTTAATATCTCGACACAGGCTATTAAGGAGCAGAGTTGTTTGGGGAAGGTTAAACTTTAG 663 0.4615 MVDREQARPLAPAIERPSSEEDDTSLQPQKQAHKKLIKRCACPLISLLLLAIVVIVLIFTVFRVKDPVMTMNGIKITTLELSNTDMTPQSGANMSLVADVSVKNPNVASFKYSNTTTSLYYRGIMVGEARLPPGRAKARRTIRMNVTIDVITDRLVSSPDFRTDLGSGLMTMSSFSRVPGQVKILNLFKRHVVVKMNCSTTFNISTQAIKEQSCLGKVKL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1095 220 SMART why 79 205 IPR013990 GO:0009269
Pvu10g1095 220 Gene3D - 53 207 - -
Pvu10g1095 220 Pfam Late embryogenesis abundant protein 100 199 IPR004864 -
Pvu10g1095 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 219 - -
Pvu10g1095 220 MobiDBLite consensus disorder prediction 1 27 - -
Pvu10g1095 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 219 - -
Pvu10g1095 220 SUPERFAMILY LEA14-like 77 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1095 Pvu-Chr10 36430054 36430977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1095 - - gmx:100799820 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1095 10 36430054 36430977 Pvu10g1095 10 36430054 36430977 ECH