Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1093 ATGGCGTCTTTGTTGCGAGCGAGAAACGCTTCTCGTGGCTCTATGGCGAGTCTTCTCCGTTGCTTCAGCAACGTTCCCGAGAACACCGTCTATTCGGGTCCCACGGCGCAGAACCCGAACAAGCGAGTCACGCTCAGGCACTTGAGCGAGAAGCACCGATCGTCCCAGCCCATCACCATGGTCACCGCTTACGATTACCCCGCCGCCGTTCACCTCGACACCGCCGCCGTCGACATCTGTCTCGTAGGCGACTCCGCCGCCATGGTGGTCCACGGCCACGACACCACGCTCCCCATCACGCTCGACGAGATGCTTGTCCACTGCCGCGCCGTGGCCCGCGGGGCCAAGACGCCGCTCCTCGTCGGGGACTTGCCTTTCGGGACCTACGAGTCCAATCCCAATCAGGCGGTGGATACAGCGGTTCGGATTTTGAAGGAAGGTGGAATGGATGCCATAAAACTTGAAGGAGGGTCTCCTTCCAGAATTGTTGCAGCGAAGGCTATTGTTGAGGCTGGAATTGCTGTCATGGGCCATGTGGGTCTTACTCCTCAGGCCATTAGTGTTTTAGGAGGGTTTAGACCTCAAGGAAGAAATGTTGCCAGTGCTGTCAAGGTTGTAGAGACTGCATTGGCTTTGCAAGAAGCAGGGTGTTTTTCTGTTGTTCTAGAATGTGTGCCTCCGCCGGTTGCCGCCGCAGCAACGGCAGCCCTTCAAATTCCCACAATTGGAATTGGTGCTGGACCCTTTTGCAGTGGACAGGTGCTGGTTTACCATGATCTGCTTGGTATGCTACAACACCCCCACCATGCAAAGGTTACTCCAAAATTCTGTAAGCAGTATGCACGTGTAGGAGACGTCATCAATAAAGCCTTACTGGAGTATAAGGAAGATGTTACAAATGGTTCGTTTCCTGATGCTCGCCATAGCCCGTACAAAATAAGCAAGACAGATGCAGATGTTTTTTCAAATGAGTTGCAGAGGTTAGGTTTGGAAAAGGCAGCATCTGCTGCATTTGAAGCAGTTCAGAAGATGGATACGGCTTAA 1044 0.5335 MASLLRARNASRGSMASLLRCFSNVPENTVYSGPTAQNPNKRVTLRHLSEKHRSSQPITMVTAYDYPAAVHLDTAAVDICLVGDSAAMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYESNPNQAVDTAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLECVPPPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVTNGSFPDARHSPYKISKTDADVFSNELQRLGLEKAASAAFEAVQKMDTA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1093 347 Pfam Ketopantoate hydroxymethyltransferase 42 305 IPR003700 GO:0003864|GO:0015940
Pvu10g1093 347 CDD KPHMT-like 45 304 IPR003700 GO:0003864|GO:0015940
Pvu10g1093 347 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 43 310 IPR003700 GO:0003864|GO:0015940
Pvu10g1093 347 Gene3D - 40 322 IPR040442 -
Pvu10g1093 347 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 42 309 IPR003700 GO:0003864|GO:0015940
Pvu10g1093 347 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 42 308 IPR015813 GO:0003824
Pvu10g1093 347 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 11 346 IPR003700 GO:0003864|GO:0015940
Pvu10g1093 347 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 11 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1093 K00606 - gmx:100808841 597.43