Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1087 ATGGAATTTTTAGACAAAGTTGTCGACGTAGTTATTGATTTTGTATGGAAACATGGTGTTCGACAAGTGACTTACATCATTCATTACAAGAAAAATGTTCATGAACTGAAAGATAGTGTTAGAGATCTTGGATTTGAAAAAGAGAGGATAGATCATCAATGTGATGAGGTTGCAAAAAATCTGAACAACATTGAAGGTAAGGTTACTGAATGGGTTAAAAAAGTGAGTGAAATTAAGACCATAGTGGAGGAGTTTGAGAACGATGATGGCCACCAAAGGGCTCAGTCGCTCAATTGTTATGTTTTTCCATACTTGTGGAATAGGCACAGATTAGGAAGACAAGCAAAGAAGATGGAAAAGGATGTTAAAATGATAATTGACGAGTCCCCTAAGTCTGATGAAGTTTCATATAGGCAAGGTGTAACATCTAATGAAGTCACATTGTCTAATTCTGTTTTTGTAGAATTTGGTTCTACAAAATCCATAATGGAAGCAGTAATGACTCAACTTGAAGATTCCACTGTGAGAATGATTGGATTGTATGGGCCAGGTGGTGTGGGTAAAAGCACTTTAATAAAAGAAATTGCAAGGAAAGCTAAATACAAGAAGTTGTTTGATGTGGTGGTTAACGTAGAAATAACAGCCAACCCCAATCTACAAAAAGTCCAAGAAGAGATTGCTTATGTTTTAGGATTGAGATTGGAAGGAGAAGGTGAAAATATGAGAGCTGATTGTCTACGAAGGAGGTTAAAGAGAGAAAAAGGGAACACCCTTCTAATCTTAGATGACCTTTTGGACAAATTAGACCTAAACAAGTTGGGGATTTTACTTATTGACGATAATGATGATGATTTAAGCAATGATAACATGGATCTTAATCGCCAAAAATTGGGAAAAAAAGATGACAAGGATCTTAATCGCAAAGTACTGAAAAAAGAAAAAATCATTGGTGTTTATAAGGGGTGCAAAATTTTGCTAACTTCACGAGATAAAAATGTGTTGTGTGTTAAAATGGATGTAAAATCGACTTTTTGCGTGAAGGAATTAGATGATAAGGATGCTTTGATGTTGTTTCAAAAGTTGGTTGGTATACATAATGAAATGTCTGGCTCTAAACAAGAAATTGTAAAGTATTGTGGAGGGTTACCCATGGCAATAGTTACAGTTGCAAGGGCATTAAAAAGCAAGAGTGAATCAGTATGGGAAGCTACACTAGAAAAACTTAAAAAGGAAGAATTGGTGGGATCGCAAACATCTATGGATATTTCAGTTAAGATGAGTTATGACCATCTTGAAAATGAAGAGATCAAGTCTATTTTCTTACTTTGTGCTCAAATGGGTCATCAACCACTAATCATGAACCTAATGAAGTATTGTTTTGGTCTGGGTATACTTGAAGGGGTCTCCTCGCTTTGGGAAGCTCGAGACAGAATTAAGACATCAATCCAAAAGCTAAAAGACTCAGGCTTGTTGTTGAACGGAAGTTCTAATAACAATTTCAATATGCATGACGTGGTTCGTGATGCTGCTTTGTCTATAGCACACAATGATCACAACTCTTTTACTTTGAGAAATGGAAAACTAGATGATTGGCCCGAACTTGAAAAGTGCACTTCTATTTCTATATGCAACAGTGATATCATTGATGGGCTTCCTGAAGTCATAAATTGTCCTCAACTTAAACTTTTCCAAATCGACACAAATGATCCATCTTTGGAAATACCAGAGAGCTTTTTTAGAACAATGAAAAATTTAAGAGTTTTAATATTGATTGGTTTTCGTGTATCAAGCTTACCATATTCAATCCAATGCTTGTTAAAACTCAGAATGCTTTGTTTGGATCGATGTACTTTAGGTTGCAATTTATCTATATTAGGGAAGCTGAAAAAGTTAAGAATTCTTAGCTTTTCTGGATCTCAAATTAAAAATTTGCCAGCTGAGTTACGGAGCTTGAATAAGTTACGACTGCTAGACATTAGCGATTGTTCTGAATTGAAGATTATCCCACCTAATCTTATATCAAGTTTGACATGTTTGGAAGAGCTATATATAAGAGAAAGTTTGATCAAAATGTTGAGAGAGGCAAAAAAAGGTCAAGATTTGTTTCTCTCTGAGTTAGAGAATTTGCATAAGTTGAAAGTGGTGGACTTAAGCGTCCCATGTGTTTCAGTTTTTCCCAATCACTTGTTCTTTGACAAGTTAAAAGATTACAAGATTGTGATTGGAGACTTAGAATTTTTTTCTGTTGGAGAATTTAGGATGCTGGATAAGTATGAAACATTCAGAGTTTTGGCATTGCAACTGAAGGATGACATTGAAATTCATTCCCACGAAAGCATAAAATTGTTGTTTAAAACAGTACAAAGTTTGTTGTTGGGAAAGATAAATGGTGTTCAAAAAGTTGTCAATCAGTTGAATATGGATGGATTTTCAGATCTGAAACACTTATCTATCATAAATAACTATGACATCAAATATGTCAATTCAACAGAATTGTACAATTATGTGAATATGATATGTTACGGTCCAGTTACAGTTGTGTCATTTGCCAAATTAAAATTCATCAAGGTTGAGATGTGTTACCAATTGAGGAATTTGTACTCCCTTTTCATGGTTAAATTTCCTATTAGTGCTCAAACATGTGAGATTTCTGAATGTAATTCTTACATGGATAAATTTCTTGCTAATCTAGAAACAATTGAGGTTTCTGAATGTAGATCTTTTAAGGAGATCCTTCAAATATCAATGCATTGTGGTAAGGTCGAGTTTCTTAAGTTGCACACTTTGACACTACGACAATTACCATCATTCACATGTTTTTACACCAAAGAGAAGGAATCTTCATTGTCATGTCTGACAGAGTTTCAAACTACAAATAGGGGCTACAGAGAAACTACTAGTGAAAAAGATGGGCAAAGTGAGAAGACGATCCCTCTTTTTGGTGATTTGGTATGA 2955 0.3472 MEFLDKVVDVVIDFVWKHGVRQVTYIIHYKKNVHELKDSVRDLGFEKERIDHQCDEVAKNLNNIEGKVTEWVKKVSEIKTIVEEFENDDGHQRAQSLNCYVFPYLWNRHRLGRQAKKMEKDVKMIIDESPKSDEVSYRQGVTSNEVTLSNSVFVEFGSTKSIMEAVMTQLEDSTVRMIGLYGPGGVGKSTLIKEIARKAKYKKLFDVVVNVEITANPNLQKVQEEIAYVLGLRLEGEGENMRADCLRRRLKREKGNTLLILDDLLDKLDLNKLGILLIDDNDDDLSNDNMDLNRQKLGKKDDKDLNRKVLKKEKIIGVYKGCKILLTSRDKNVLCVKMDVKSTFCVKELDDKDALMLFQKLVGIHNEMSGSKQEIVKYCGGLPMAIVTVARALKSKSESVWEATLEKLKKEELVGSQTSMDISVKMSYDHLENEEIKSIFLLCAQMGHQPLIMNLMKYCFGLGILEGVSSLWEARDRIKTSIQKLKDSGLLLNGSSNNNFNMHDVVRDAALSIAHNDHNSFTLRNGKLDDWPELEKCTSISICNSDIIDGLPEVINCPQLKLFQIDTNDPSLEIPESFFRTMKNLRVLILIGFRVSSLPYSIQCLLKLRMLCLDRCTLGCNLSILGKLKKLRILSFSGSQIKNLPAELRSLNKLRLLDISDCSELKIIPPNLISSLTCLEELYIRESLIKMLREAKKGQDLFLSELENLHKLKVVDLSVPCVSVFPNHLFFDKLKDYKIVIGDLEFFSVGEFRMLDKYETFRVLALQLKDDIEIHSHESIKLLFKTVQSLLLGKINGVQKVVNQLNMDGFSDLKHLSIINNYDIKYVNSTELYNYVNMICYGPVTVVSFAKLKFIKVEMCYQLRNLYSLFMVKFPISAQTCEISECNSYMDKFLANLETIEVSECRSFKEILQISMHCGKVEFLKLHTLTLRQLPSFTCFYTKEKESSLSCLTEFQTTNRGYRETTSEKDGQSEKTIPLFGDLV* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1087 984 Pfam NB-ARC domain 320 423 IPR002182 GO:0043531
Pvu10g1087 984 Pfam NB-ARC domain 162 279 IPR002182 GO:0043531
Pvu10g1087 984 SMART AAA_5 174 344 IPR003593 -
Pvu10g1087 984 Gene3D - 135 342 IPR027417 -
Pvu10g1087 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 443 IPR027417 -
Pvu10g1087 984 Gene3D - 348 432 IPR042197 -
Pvu10g1087 984 Gene3D Ribonuclease Inhibitor 533 959 IPR032675 -
Pvu10g1087 984 SUPERFAMILY L domain-like 502 910 - -
Pvu10g1087 984 PRINTS Disease resistance protein signature 177 192 - -
Pvu10g1087 984 PRINTS Disease resistance protein signature 251 265 - -
Pvu10g1087 984 PRINTS Disease resistance protein signature 379 393 - -
Pvu10g1087 984 PRINTS Disease resistance protein signature 649 665 - -
Pvu10g1087 984 PANTHER RPP4C4 6 984 - -
Pvu10g1087 984 PANTHER - 6 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1087 Pvu-Chr10 36290624 36300443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1087 551 687 Receptor kinase-like Gene Family AT3G47570 34.286 1.80e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1087 - - var:108346612 1389.4