Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1084 ATGCCAACCCTTCTCTCTGTAATTGCAACTCCAACTCCCACTTTCACACTCACTCTCAACAAAACCCTAATTTCTCTTCCCAACCCCTACTCACTCTCCTATAAATTCAACTCCCTCATCTCCCACTGCTCCCTCTCCCACCGCGAGGAAGACCGCTGGCTCCGAGAAGAGCAGCGCTGGCTCCGCGACGAACAGCGCTGGCTCCGCGAGGAGCAGCGCTGGGCTCGCGAACGTGATCAACTCCTCCGCGAGATCTCCGACCTCAAGCTCCAAATCCAGGCGATGGAGCGTCGCCTCTCCACGCGCGAATTGTCCACTCCGGCCTCCGTCTCCGACGCCGTCGCTAATGTGGCGTTGCTCTTGCAGGTGCTGAAGGACAAGAATATGGTTCTCGAGAGCGGTTCGAGTGTTCGGAAGATGGAGGATGTTATAACACACACTGAAGACACTCTCAAGAACAGAGAAGAAAAGGGAACAAGTGATCTGGAGGAGAAGCAATTTGAAGAGGAGGAGAAACGATTTGAAGAGGTCATGGAAAGGAAGAATGAGGTTGTGGTGGTTGAGGAGTCTGTGAGGGTTGAAACGAGCATTTTGAGGAAAGGTTCTGAAGGAGAAGAGGTTCGACAGATGCAGGAAGCGTTGCTGAACTTGGGGTTTTACTCGGGCGAGGAAGACATGGAATACTCAAGCTTCTCAAGTGGAACAGAGCGTGCTGTGAAGACTTGGCAAGCTGCATTAGGTGTCCCTGAGGATGGTATTATGACTGCTGAACTTCTTGGAAGGCTCTATTTGGAGATAAGGAAAAAGAACGCTGGCAGCACGACTCAAGATAAACAATCTACTACTGTTTTACCAAAAGAAGGTGAAAATGGAGCTGCAGTTCCTTCAGTGACAGATATTTCAGAGGTTCAGCAAAATGTAGCGAAAAGTGATAAGGGAACAGAAGTCAACGATCGAAGAGTTTTTCTCCTTGGGGAGAATCGATGGGAAGAGCCATCAAGACTTGTCGCAAGTGATGGAGTTGATAGGAGCAATAACAAGAATGCAACGACAAAATGCCTTCAATGTCGTGGGGAAGGCCGCTTGATGTGTACAGAGTGTGATGGATCTGGCGAACCAAATATTGAACCTCAATTTTTGGAATGGGTGGAGGAGGGCACAAAATGCCCATACTGTAACGGTCTAGGGCATACTATATGTGATTTATGTGGAGGGAAAACTATGGTTTAG 1230 0.4902 MPTLLSVIATPTPTFTLTLNKTLISLPNPYSLSYKFNSLISHCSLSHREEDRWLREEQRWLRDEQRWLREEQRWARERDQLLREISDLKLQIQAMERRLSTRELSTPASVSDAVANVALLLQVLKDKNMVLESGSSVRKMEDVITHTEDTLKNREEKGTSDLEEKQFEEEEKRFEEVMERKNEVVVVEESVRVETSILRKGSEGEEVRQMQEALLNLGFYSGEEDMEYSSFSSGTERAVKTWQAALGVPEDGIMTAELLGRLYLEIRKKNAGSTTQDKQSTTVLPKEGENGAAVPSVTDISEVQQNVAKSDKGTEVNDRRVFLLGENRWEEPSRLVASDGVDRSNNKNATTKCLQCRGEGRLMCTECDGSGEPNIEPQFLEWVEEGTKCPYCNGLGHTICDLCGGKTMV* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1084 409 Pfam Putative peptidoglycan binding domain 204 261 IPR002477 -
Pvu10g1084 409 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 340 408 IPR036410 -
Pvu10g1084 409 Coils Coil 160 180 - -
Pvu10g1084 409 MobiDBLite consensus disorder prediction 270 295 - -
Pvu10g1084 409 PANTHER PROTEIN DISULFIDE ISOMERASE PTAC5, CHLOROPLASTIC 20 408 - -
Pvu10g1084 409 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 20 408 - -
Pvu10g1084 409 MobiDBLite consensus disorder prediction 270 286 - -
Pvu10g1084 409 SUPERFAMILY PGBD-like 195 263 IPR036365 -
Pvu10g1084 409 Gene3D - 192 263 IPR036366 -
Pvu10g1084 409 Coils Coil 71 98 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1084 K22519 - gmx:100808436 552.747