Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1065 ATGTCCACCATGAAGAACAGTTTCAAAGACGCTGACCATTTATACTCTTCATGGAGCTTCTCAAAGCTAATGGCTTTCTTCTTCTTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTGAGCCATTCCTATGACTGTGATCAACCTTCCCACATTCCCACCATCACCCACCATCACATATCCATCACCCCACCTGAACAAGAGTCCCCACCCTTTGAAGAAACGAGCCTTTCCCACATAGTCTTTGGCATAGGGGCCTCAGCCAAGCTTTGGAAGCAGAGAAAAGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTTGTGTGGCTAGAGCAGAAGGTGAAACCTGAACCTGGTGATGAGAATTCCTTGCCCTTGTTGAGGATCTCCGGTGACACTTCAAGGTTCAAGTATAAGAATCCAAAGGGGCATAGATCGGCTATCAGAATCTCACGCATAGTGTCTGAGACACTCAGGCTTGGAATGAAGGATGTGAGGTGGTTTGTGATGGGGGACGATGACACCGTTTTTGTGGCAGAAAATTTGGTGAAGGTTTTGCAGAAGTATGACCATAATCAGTTCTATTACATTGGGAGTTCTTCTGAGAGTCACTTGCAAAATATATACTTTTCTTATAATATGGCTTATGGGGGTGGTGGTTTTGCCATCAGTTATCCTTTGGCTGTGGCATTGGAGAAAATGCAAGATAGGTGCATTCAGAGGTATCCTGGGTTGTATGGCTCTGATGACAGAATTCAAGCTTGTATGGCAGAATTAGGAGTTCCACTCACCAAGGAGAAAGGGTTCCATCAGTTCGATGTATACGGCAATCTCTTTGGGCTTCTGGCGGCCCATCCACTTGCGCCACTGGTGTCCCTACATCACTTGGACGTGGTTGAGCCCATATTTCCAAACGTGAGCCGGGTGCAGGCCTTGAACCGCCTGGGCGGGCCCATGAAGCTCGACCCAGCCGGGCTCATGCAGCAGTCCATTTGCTACGACAAAGCCCGGAGCTGGACCGTATCCGTTTCATGGGGATACGCGGTTCAAATATTCCGGGGCATTTTCTCGGCCCGGGAAATGGAGATGCCGGCGAGGACGTTCCTCAACTGGTACAAACGGGCTGATTACACGTCGTATCCGTTCAACACCCGCCCCGTCAGCCGCCATGTTTGTCAGAAACCTTTTGTCTATTTCTTGTCAGAGGCTGTGCATGGCGATGCTGCCAATGAAACTTCCAGTCGTTATATACGGGTTCAGAAAAACCCCGATTGCAAGTGGAAGATGGAGGATCCGACCCGGATCAAATCGGTGGAAGTTCGTAAGAAAATCGACCAGCACTTGTGGGATAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGTACAAAGAAGAAAGGAACTCTGGTGATTGATGTGGGGGAATGCAGGGAGGATGAAGTTGTTGAATTGTAG 1473 0.4868 MSTMKNSFKDADHLYSSWSFSKLMAFFFFLISISYLFYSLRFVSHSYDCDQPSHIPTITHHHISITPPEQESPPFEETSLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQKVKPEPGDENSLPLLRISGDTSRFKYKNPKGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPLAPLVSLHHLDVVEPIFPNVSRVQALNRLGGPMKLDPAGLMQQSICYDKARSWTVSVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTSYPFNTRPVSRHVCQKPFVYFLSEAVHGDAANETSSRYIRVQKNPDCKWKMEDPTRIKSVEVRKKIDQHLWDKAPRRNCCRVRRTKKKGTLVIDVGECREDEVVEL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1065 490 Pfam Protein of unknown function, DUF604 212 464 IPR006740 -
Pvu10g1065 490 PANTHER FRINGE-RELATED 1 489 - -
Pvu10g1065 490 Gene3D - 70 319 - -
Pvu10g1065 490 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1065 Pvu-Chr10 35929255 35932467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1065 21 484 Glycosyltransferase AT5G41460 66.462 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1065 - - gmx:100789583 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1065 10 35929255 35932467 Pvu10g1065 10 35929255 35932467 ECH
Pvu8g0609 8 5364174 5367480 Pvu10g1065 10 35929255 35932467 PCT