Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1057 ATGTTTGTGCCTTTTATAATGGCTTCAGGTGGTGACAATGCAAAAAAAGAAAGTATTAGGAAAGACACTGCATGGAATCATTGTGTTTTTATTGATGAAAACTCAAGAAATGTAAAATGTAAATATTGTGAAAAGGTATTAACTGGAGGTATTTACATACTAAAACATCATCTTGCAAGCATTTCAAAGGATGTTGGAGCATGTCTTTCCATTCTCGAAAAGGATAAAAATTTAATGATGGGTATTGTTTCTATGTTGCAACAAAATTTAATCAAGAAATCTATGTCAAGAGAAGACTTGGATAGTAATGTGGGTGATTATGAAAATTTTAGAAAAAATACCAACTCAAGAAGAGAGTGGGGTGAGTCATCAAGTATTTTCAAGAGAAGGGAAACTCAAAGTACTATCAATTTCATCTTCAAGAAAAGTGAGAGGGAAGATGCATGTCAAGAAATTGTTTTATTTTTCTACAACAATGTTATTCCATTTAGTGTAGCAAAGGGTGAAAAGTTCAGTAAAATGGTTGACATGATTTCCAAATACGGTCCCGATTTAAGTCACCATCATACCATGAAATCAGGGTGA 585 0.3265 MFVPFIMASGGDNAKKESIRKDTAWNHCVFIDENSRNVKCKYCEKVLTGGIYILKHHLASISKDVGACLSILEKDKNLMMGIVSMLQQNLIKKSMSREDLDSNVGDYENFRKNTNSRREWGESSSIFKRRETQSTINFIFKKSEREDACQEIVLFFYNNVIPFSVAKGEKFSKMVDMISKYGPDLSHHHTMKSG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1057 194 PANTHER HAT TRANSPOSON SUPERFAMILY 21 186 - -
Pvu10g1057 194 Pfam BED zinc finger 23 59 IPR003656 GO:0003677
Pvu10g1057 194 PANTHER OSJNBA0013A04.12 PROTEIN 21 186 - -
Pvu10g1057 194 ProSiteProfiles Zinc finger BED-type profile. 19 75 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1057 Pvu-Chr10 35861469 35863970 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1057 - - pvu:PHAVU_010G101300g 396.356