Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1041 ATGGCGACAGCGAGACGAAACTTCCCGTCGATAACAGAATGCAACGGGACCAAGTCGTCGCCGCCGGATTCCGTTGCCGCTGACCTCGACGGCACGCTCCTCATCTCCAGCAGTTCATTCCCGTACTTCATGATGGTCGCCGTCGAAGCCGGCAGCCTTCTCCGCGGCTTCATCCTCCTCCTCGCCGTTCCGCTCATCATCTTCGCGTACCTCTTCATATCCGAATCCCTCGGCATCCAGATCCTCATCTTCATCTCCTACTCCGGCCTTAAGATCCGTGACATCGAACTCGTCTCACGTGCGGTGCTCCCTAGGTTTTATGCTGCGGACGTGAGAAAGGAGAGCTTCGAGATGTTCGACCGGTGCAAGAGAAAGGTCGTGGTGACGGCGAATCCAACAGTGATGGTGGAGCCGTTCGTGAAGGACTTTCTTGGTGGAGACAAGGTGCTAGGAACGGAGATCGAGGTGAATCCGAAGACGAAGAAGGCTACCGGATTCGTGAAGAAGCCTGGCGTGCTCGTGGGAAAGTTGAAGCGTCTTGCGGTTTCAAAAGAGTTCGGCGAGGATTCCCCGGATATTGGACTCGGAGATCGTAAAACTGACTTCGATTTCATGTCTATTTGCAAGGAGGGTTACATGGTGCCTCCGAGCAAATCAGCAAAACCAGTACCACAGGAGCGTCTGAAGAGCAGGCTCATCTTCCACGATGGTCGTTTTGTGCAGAAGCCAGACCCACTGAACGCTCTCATCACCTTCCTGTGGCTACCCTTTGGTTTTATCCTCTCCATTATAAGGGTCTACTTCAACCTTCCCCTCCCCGAACGCATCGTGCGCTACACCTACGAAATGCTGGGCATCAAGCTCGTCATCCGCGGCCACCGTCCTCCCCCACCGTCTCCTGGCACTCCCGGCAACCTCTATGTCTGCAACCACCGCACCGCCCTTGACCCCATCGTCATCGCTATCGCCCTCGGCCGCAAGGTCTCCTGCGTCACCTACAGCGTCAGCAAGCTCTCCCGATTCCTTTCGCCGATCCCCGCCGTCGCCCTCACTCGCGATCGCGCTGCCGACGCCGCCCGCATCACCGAGATCCTGCAGAAGGGTGACCTGGTCGTGTGCCCCGAGGGCACCACGTGTCGCGAGCCCTTTTTGCTTCGCTTCAGCGCCCTCTTCGCCGAGCTGAGCGACAGAATCGTTCCCGTGGCTGTTGACTGCAAGCAGAATATGTTCTTTGGGACGACTGTTCGCGGTATCAAATTCTGGGACCCTTACTTCTTCTTCATGAACCCTAGGCCAGTTTACGAGGTTACCTTCCTTGACCCCTTGCCGGAGGAGATGTCATGCAAGGCAGGGGGGAAGAGCTCGATTGAGGTGGCGAATCATGTGCAGAAGGTGCTGGGGGATGTGTTGGGGTTCGAGTGCACGGGGTTGACTAGGAAGGATAAGTATTTGTTGTTGGGTGGGAATGATGGGAAGGTGGAGTCTCTGTATGGTTCCAAGAAGTGA 1506 0.5637 MATARRNFPSITECNGTKSSPPDSVAADLDGTLLISSSSFPYFMMVAVEAGSLLRGFILLLAVPLIIFAYLFISESLGIQILIFISYSGLKIRDIELVSRAVLPRFYAADVRKESFEMFDRCKRKVVVTANPTVMVEPFVKDFLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGKLKRLAVSKEFGEDSPDIGLGDRKTDFDFMSICKEGYMVPPSKSAKPVPQERLKSRLIFHDGRFVQKPDPLNALITFLWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFFGTTVRGIKFWDPYFFFMNPRPVYEVTFLDPLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYLLLGGNDGKVESLYGSKK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1041 501 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 220 491 - -
Pvu10g1041 501 Gene3D - 101 229 IPR023214 -
Pvu10g1041 501 PANTHER BNAC05G00450D PROTEIN 4 500 - -
Pvu10g1041 501 Pfam haloacid dehalogenase-like hydrolase 26 205 - -
Pvu10g1041 501 MobiDBLite consensus disorder prediction 1 22 - -
Pvu10g1041 501 Pfam Acyltransferase 304 394 IPR002123 GO:0016746
Pvu10g1041 501 CDD LPLAT 281 442 - -
Pvu10g1041 501 MobiDBLite consensus disorder prediction 1 23 - -
Pvu10g1041 501 SMART plsc_2 305 406 IPR002123 GO:0016746
Pvu10g1041 501 PANTHER ANCIENT UBIQUITOUS PROTEIN 4 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1041 Pvu-Chr10 35507011 35511367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1041 6 501 Acyl Lipid Metabolism Gene Families AT4G00400 79.234 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1041 K13508 - gmx:100794137 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1041 10 35507011 35511367 Pvu10g1041 10 35507011 35511367 ECH